RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 H3F3AP84243 136 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 HOXC5Q00444 222 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 RASGEF1BQ0VAM2 473 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 BNIP2Q12982 314 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 CAPRIN1Q14444 709 aaKnown RBP14.53□□□□□ -0.08
ATL3-202ENST00000535789 GLIPR1L2Q4G1C9 344 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 TMEM201Q5SNT2 666 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 GCNT6Q5T4J0 391 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 SPNS3Q6ZMD2 512 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 ZNF771Q7L3S4 317 aaPredicted RBP14.53□□□□□ -0.08
ATL3-202ENST00000535789 PTOV1Q86YD1 416 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 CCDC103Q8IW40 242 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 PGAM4Q8N0Y7 254 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 SLC43A2Q8N370 569 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 BBS10Q8TAM1 723 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 REXO5Q96IC2 774 aaKnown RBP14.53□□□□□ -0.08
ATL3-202ENST00000535789 WFDC6Q9BQY6 131 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 SPATA9Q9BWV2 254 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 CXXC4Q9H2H0 198 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 GID8Q9NWU2 228 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 KLHL9Q9P2J3 617 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 NDRG3Q9UGV2 375 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 ACANP16112 2415 aa14.53□□□□□ -0.08
ATL3-202ENST00000535789 IGKV3D-15A0A087WSY6 115 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 TMEM229AB2RXF0 380 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 ZNF208O43345 1280 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 KLF4O43474 513 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 TPST1O60507 370 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 TFPIP10646 304 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 PSMB1P20618 241 aaKnown RBP14.52□□□□□ -0.09
ATL3-202ENST00000535789 OR3A2P47893 321 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 ART1P52961 327 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 PSME3P61289 254 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 RUNDC3AQ59EK9 446 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 PRAMEF8Q5VWM4 474 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 PRAMEF7Q5VXH5 474 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 GTF2IRD2BQ6EKJ0 949 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 C16orf89Q6UX73 402 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 BEND4Q6ZU67 534 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 GTF2IRD2Q86UP8 949 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 DEFB107AQ8IZN7 70 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 NINJ1Q92982 152 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 C3orf49Q96BT1 292 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 ACTR6Q9GZN1 396 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 RAD21L1Q9H4I0 556 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 THUMPD1Q9NXG2 353 aaKnown RBP14.52□□□□□ -0.09
ATL3-202ENST00000535789 NDE1Q9NXR1 346 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 HDGFL3Q9Y3E1 203 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 SPIN1Q9Y657 262 aaPredicted RBP14.52□□□□□ -0.09
ATL3-202ENST00000535789 ARID1AO14497 2285 aa14.52□□□□□ -0.09
ATL3-202ENST00000535789 PLCE1Q9P212 2302 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 ZNF724A8MTY0 619 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 GYG2O15488 501 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 SLC6A2P23975 617 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 HTR2AP28223 471 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 HTR3AP46098 478 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 MTPNP58546 118 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 CSNK2A1P68400 391 aaPredicted RBP14.51□□□□□ -0.09
ATL3-202ENST00000535789 CDK6Q00534 326 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 GNA13Q14344 377 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 DNAL1Q4LDG9 190 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 ZNF311Q5JNZ3 666 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 NANOGP8Q6NSW7 305 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 ATG4DQ86TL0 474 aaPredicted RBP14.51□□□□□ -0.09
ATL3-202ENST00000535789 ZNF440Q8IYI8 595 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 CADM2Q8N3J6 435 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 S100PBPQ96BU1 408 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 PIK3IP1Q96FE7 263 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 ANKRD27Q96NW4 1050 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 HOPXQ9BPY8 73 aaPredicted RBP14.51□□□□□ -0.09
ATL3-202ENST00000535789 CADM1Q9BY67 442 aaKnown RBP14.51□□□□□ -0.09
ATL3-202ENST00000535789 TMEM38AQ9H6F2 299 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 NANOGQ9H9S0 305 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 TMEM181Q9P2C4 612 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 ABCD2Q9UBJ2 740 aa14.51□□□□□ -0.09
ATL3-202ENST00000535789 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.51□□□□□ -0.09
ATL3-202ENST00000535789 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.5□□□□□ -0.09
ATL3-202ENST00000535789 ADAP00813 363 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 ETS2P15036 469 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 CD53P19397 219 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 COX5AP20674 150 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 CLK1P49759 484 aaKnown RBP14.5□□□□□ -0.09
ATL3-202ENST00000535789 P2RY4P51582 365 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 SLC16A1P53985 500 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 SCARB2Q14108 478 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 LARS2Q15031 903 aaKnown RBP14.5□□□□□ -0.09
ATL3-202ENST00000535789 RABL3Q5HYI8 236 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 FBXW10Q5XX13 1052 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 WBP2NLQ6ICG8 309 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 KRTAP1-3Q8IUG1 177 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 OR8J3Q8NGG0 315 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 FOXC2Q99958 501 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 PRR14Q9BWN1 585 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 CMTM6Q9NX76 183 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 ZNF226Q9NYT6 803 aa14.5□□□□□ -0.09
ATL3-202ENST00000535789 HEATR1Q9H583 2144 aaKnown RBP14.5□□□□□ -0.09
ATL3-202ENST00000535789 LIPT2A6NK58 231 aa14.49□□□□□ -0.09
ATL3-202ENST00000535789 NME4O00746 187 aa14.49□□□□□ -0.09
ATL3-202ENST00000535789 GSC2O15499 205 aa14.49□□□□□ -0.09
ATL3-202ENST00000535789 DNPH1O43598 174 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms