RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SH3YL1Q96HL8 342 aaPredicted RBP3.06□□□□□ -1.92
PRKDC-205ENST00000535375 CELF6Q96J87 481 aaKnown RBP3.06□□□□□ -1.92
PRKDC-205ENST00000535375 TGM7Q96PF1 710 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 SLC25A22Q9H936 323 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 LRRC40Q9H9A6 602 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 UFSP2Q9NUQ7 469 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 AIG1Q9NVV5 245 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 NPIPA1Q9UND3 350 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 IKBKGQ9Y6K9 419 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 ARID1AO14497 2285 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 GTF3C1Q12789 2109 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 TRIM64CA6NLI5 447 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 PP2D1A8MPX8 630 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 TAPBPO15533 448 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 ZNF780AO75290 641 aaPredicted RBP3.05□□□□□ -1.92
PRKDC-205ENST00000535375 IGHG4P01861 327 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 LAP3P28838 519 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 HPCAL1P37235 193 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 AP3M2P53677 418 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 MESDQ14696 234 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 TMEM225Q6GV28 225 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 OR10A7Q8NGE5 316 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 OR4D5Q8NGN0 318 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 OR1F12Q8NHA8 337 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 SLC17A9Q9BYT1 436 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 VCX2Q9H322 139 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 ZNF385DQ9H6B1 395 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 RAB18Q9NP72 206 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 TREM2Q9NZC2 230 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 PCSK1NQ9UHG2 260 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 NUFIP1Q9UHK0 495 aaKnown RBP3.05□□□□□ -1.92
PRKDC-205ENST00000535375 ANGPTL2Q9UKU9 493 aa3.05□□□□□ -1.92
PRKDC-205ENST00000535375 TRAV26-1A0A087WT03 109 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 METTL21EPA6NDL7 271 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 NBR2O15453 112 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 UGT2B17O75795 530 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 CA1P00915 261 aaPredicted RBP3.04□□□□□ -1.92
PRKDC-205ENST00000535375 MMP11P24347 488 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 P2RY1P47900 373 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 CASP4P49662 377 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 PAX5Q02548 391 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 LRRC74AQ0VAA2 488 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 C1orf61Q13536 156 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 MXD4Q14582 209 aaPredicted RBP3.04□□□□□ -1.92
PRKDC-205ENST00000535375 GANABQ14697 944 aaKnown RBP3.04□□□□□ -1.92
PRKDC-205ENST00000535375 PTGES3Q15185 160 aaKnown RBP3.04□□□□□ -1.92
PRKDC-205ENST00000535375 SHHQ15465 462 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 EXOC3L2Q2M3D2 409 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 C10orf120Q5SQS8 335 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 FAM199XQ6PEV8 388 aaPredicted RBP3.04□□□□□ -1.92
PRKDC-205ENST00000535375 NLRP9Q7RTR0 991 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 C16orf62Q7Z3J2 963 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 VSTM4Q8IW00 320 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 SLC38A6Q8IZM9 456 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 LRRC75A-AS1Q8N1F1 130 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 OR5L2Q8NGL0 311 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 N4BP2L2Q92802 583 aaPredicted RBP3.04□□□□□ -1.92
PRKDC-205ENST00000535375 ZBTB18Q99592 522 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 CCT7Q99832 543 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 RASL11BQ9BPW5 248 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 B3GNT2Q9NY97 397 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 AIPL1Q9NZN9 384 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 MTRF1LQ9UGC7 380 aaKnown RBP3.04□□□□□ -1.92
PRKDC-205ENST00000535375 HPCAL4Q9UM19 191 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 RPH3ALQ9UNE2 315 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 ASF1AQ9Y294 204 aa3.04□□□□□ -1.92
PRKDC-205ENST00000535375 PNPLA6Q8IY17 1366 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 IGHV2-70DA0A0C4DH43 119 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 E7ESA3 106 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 MPHOSPH10O00566 681 aaKnown RBP3.03□□□□□ -1.92
PRKDC-205ENST00000535375 TPST2O60704 377 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 ZNF324O75467 553 aaPredicted RBP3.03□□□□□ -1.92
PRKDC-205ENST00000535375 SLC25A27O95847 323 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 IL1BP01584 269 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 PCCAP05165 728 aaPredicted RBP3.03□□□□□ -1.92
PRKDC-205ENST00000535375 CYP2B6P20813 491 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 GRIA1P42261 906 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 LHX2P50458 406 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 SH3BGRP55822 239 aaPredicted RBP3.03□□□□□ -1.92
PRKDC-205ENST00000535375 ARL6IP1Q15041 203 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 TSPO2Q5TGU0 170 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 C1orf146Q5VVC0 180 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 LRRC31Q6UY01 552 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 SYT10Q6XYQ8 523 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 Q6ZPB1 254 aaPredicted RBP3.03□□□□□ -1.92
PRKDC-205ENST00000535375 MOB3BQ86TA1 216 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 ACOT1Q86TX2 421 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 TMEM123Q8N131 208 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 DHRSXQ8N5I4 330 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 STXBP6Q8NFX7 210 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 OR13C2Q8NGS9 318 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 TCTEX1D2Q8WW35 142 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 NT5C3BQ969T7 300 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 FAM210BQ96KR6 192 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 PGLYRP4Q96LB8 373 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 NRIP2Q9BQI9 281 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 NIPSNAP3BQ9BS92 247 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 TMEM43Q9BTV4 400 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 POLDIP2Q9Y2S7 368 aa3.03□□□□□ -1.92
PRKDC-205ENST00000535375 RRP15Q9Y3B9 282 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms