RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 NR5A2O00482 541 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 GPR171O14626 319 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 HS3ST1O14792 307 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 EIF1BO60739 113 aaKnown RBP12.41□□□□□ -0.42
SF3B2-215ENST00000534307 LYZL6O75951 148 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 PGM3O95394 542 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 OR2B6P58173 313 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 SLC35A1P78382 337 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 SLC17A1Q14916 467 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 LARS2Q15031 903 aaKnown RBP12.41□□□□□ -0.42
SF3B2-215ENST00000534307 NCMAPQ5T1S8 102 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 SHEQ5VZ18 495 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 FBXW9Q5XUX1 488 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 WBP2NLQ6ICG8 309 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 ADAM5Q6NVV9 412 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 PAQR6Q6TCH4 344 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 SERPINA11Q86U17 422 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 LILRB1Q8NHL6 650 aaPredicted RBP12.41□□□□□ -0.42
SF3B2-215ENST00000534307 DYDC1Q8WWB3 177 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 SLC35B4Q969S0 331 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 MAGEB18Q96M61 343 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 RAD21L1Q9H4I0 556 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 IKZF5Q9H5V7 419 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF385DQ9H6B1 395 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 MALT1Q9UDY8 824 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 NOSIPQ9Y314 301 aaKnown RBP12.41□□□□□ -0.42
SF3B2-215ENST00000534307 IFT52Q9Y366 437 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 CADP27708 2225 aa12.41□□□□□ -0.42
SF3B2-215ENST00000534307 ANK3Q12955 4377 aaKnown RBP12.4□□□□□ -0.42
SF3B2-215ENST00000534307 LIPT2A6NK58 231 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 TMEM229AB2RXF0 380 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 PDLIM1O00151 329 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 SMPD2O60906 423 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 NPIPB7O75200 414 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 ARAFP10398 606 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 ETS2P15036 469 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 PAX1P15863 534 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 ADSLP30566 484 aaPredicted RBP12.4□□□□□ -0.42
SF3B2-215ENST00000534307 P2RY4P51582 365 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 SQLEQ14534 574 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 DLEU7Q6UYE1 221 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 COMTD1Q86VU5 262 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF100Q8IYN0 542 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF433Q8N7K0 673 aaPredicted RBP12.4□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF611Q8N823 705 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 BBS10Q8TAM1 723 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 APH1AQ96BI3 265 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 C3orf49Q96BT1 292 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 GSX2Q9BZM3 304 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF232Q9UNY5 417 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 FLVCR1Q9Y5Y0 555 aa12.4□□□□□ -0.42
SF3B2-215ENST00000534307 A0A1W2PP18 115 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 TMEM247A6NEH6 219 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 DPRXA6NFQ7 191 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 OR5H1A6NKK0 313 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 IGHV3-9P01782 118 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 GPX2P18283 190 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 IDUAP35475 653 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 BSPH1Q075Z2 132 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 BNIP2Q12982 314 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 ADRM1Q16186 407 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 AGKQ53H12 422 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 ZNF311Q5JNZ3 666 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 Q5PR19 223 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 TIMM23BQ5SRD1 257 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 GCNT6Q5T4J0 391 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 PRSS57Q6UWY2 283 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 CXXC5Q7LFL8 322 aaKnown RBP12.39□□□□□ -0.43
SF3B2-215ENST00000534307 P2RY8Q86VZ1 359 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 CADM2Q8N3J6 435 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 ZIC4Q8N9L1 334 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 AKAP1Q92667 903 aaKnown RBP eCLIP12.39□□□□□ -0.43
SF3B2-215ENST00000534307 CPPED1Q9BRF8 314 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-215ENST00000534307 NAA11Q9BSU3 229 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-215ENST00000534307 ESRP2Q9H6T0 727 aaKnown RBP12.39□□□□□ -0.43
SF3B2-215ENST00000534307 ZNF701Q9NV72 531 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-215ENST00000534307 NPAP1Q9NZP6 1156 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 RNF115Q9Y4L5 304 aa12.39□□□□□ -0.43
SF3B2-215ENST00000534307 AQP7P3A6NL99 342 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 A8MVM7 634 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 ARHGEF9O43307 516 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 FRS3O43559 492 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 EDF1O60869 148 aaKnown RBP12.38□□□□□ -0.43
SF3B2-215ENST00000534307 TMCC2O75069 709 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 FZD7O75084 574 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 MRPL33O75394 65 aaKnown RBP12.38□□□□□ -0.43
SF3B2-215ENST00000534307 GPIP06744 558 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 ITGA5P08648 1049 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 GGT1P19440 569 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 PPIBP23284 216 aaKnown RBP12.38□□□□□ -0.43
SF3B2-215ENST00000534307 CXCR1P25024 350 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 PRKAR1BP31321 381 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 FOXG1P55316 489 aaPredicted RBP12.38□□□□□ -0.43
SF3B2-215ENST00000534307 COPZ1P61923 177 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 HOXC5Q00444 222 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 CDK6Q00534 326 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 CEACAM7Q14002 265 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 PPA1Q15181 289 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 OTUD3Q5T2D3 398 aaPredicted RBP12.38□□□□□ -0.43
SF3B2-215ENST00000534307 ALKBH2Q6NS38 261 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms