RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 GTF2IRD2Q86UP8 949 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 SLC30A8Q8IWU4 369 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 TMEM99Q8N816 258 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 LSMEM1Q8N8F7 131 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 FAM156AQ8NDB6 213 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 ELOA3Q8NG57 546 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 SLC35B4Q969S0 331 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 SLC25A36Q96CQ1 311 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 TPD52L3Q96J77 140 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 HOPXQ9BPY8 73 aaPredicted RBP11.91□□□□□ -0.5
CMTM1-219ENST00000533953 ZNF559Q9BR84 538 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 POTEKPQ9BYX7 375 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 TRIM2Q9C040 744 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 TMEM27Q9HBJ8 222 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 PLSCR4Q9NRQ2 329 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 ADPRHL2Q9NX46 363 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 ADA2Q9NZK5 511 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 SEC14L4Q9UDX3 406 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 TAGLN3Q9UI15 199 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 NOTCH2Q04721 2471 aa11.91□□□□□ -0.5
CMTM1-219ENST00000533953 LRRN3E7EW58 273 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 CXCR6O00574 342 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 GSTA4O15217 222 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 NPIPB7O75200 414 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 DCTN3O75935 186 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 LYPD3O95274 346 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 IGHV3-9P01782 118 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 CD8BP10966 210 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 FUT4P22083 530 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 HCFC1P51610 2035 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 NCALDP61601 193 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 RNPS1Q15287 305 aaKnown RBP11.9□□□□□ -0.5
CMTM1-219ENST00000533953 ENTPD8Q5MY95 495 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 GKAP1Q5VSY0 366 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-219ENST00000533953 WDR88Q6ZMY6 472 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 CARM1Q86X55 608 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 KDM8Q8N371 416 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 ANKS4BQ8N8V4 417 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 CCDC197Q8NCU1 140 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 OR6K3Q8NGY3 331 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 TAAR8Q969N4 342 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 PTDSS2Q9BVG9 487 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 KLHL4Q9C0H6 718 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 CELSR2Q9HCU4 2923 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 GLRX2Q9NS18 164 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 TESQ9UGI8 421 aaKnown RBP11.9□□□□□ -0.5
CMTM1-219ENST00000533953 EGFL7Q9UHF1 273 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 PRSS50Q9UI38 385 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 TRAPPC4Q9Y296 219 aa11.9□□□□□ -0.5
CMTM1-219ENST00000533953 NBPF19A0A087WUL8 3843 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 A0A0B4J2E0 115 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 A0A1B0GX12 115 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 ZNF716A6NP11 495 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 C8BP07358 591 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 POU2F1P14859 743 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 TCN1P20061 433 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-219ENST00000533953 CCKARP32238 428 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 CD79BP40259 229 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 YAP1P46937 504 aaKnown RBP11.89□□□□□ -0.51
CMTM1-219ENST00000533953 SLC35A1P78382 337 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 H3F3AP84243 136 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 TLE4Q04727 773 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 LTBQ06643 244 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 OTUD3Q5T2D3 398 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-219ENST00000533953 EEF1A1P5Q5VTE0 462 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 ABLIM2Q6H8Q1 611 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 ULK3Q6PHR2 472 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 TFAP2EQ6VUC0 442 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 DEF8Q6ZN54 512 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 ARPINQ7Z6K5 226 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 VTCN1Q7Z7D3 282 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 RANBP3LQ86VV4 465 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-219ENST00000533953 SLC43A2Q8N370 569 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 RBM15BQ8NDT2 890 aaKnown RBP11.89□□□□□ -0.51
CMTM1-219ENST00000533953 BHLHE22Q8NFJ8 381 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-219ENST00000533953 PROX1Q92786 737 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 ZHX1-C8orf76Q96EF9 292 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 SLC47A1Q96FL8 570 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 WFIKKN1Q96NZ8 548 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 KCTD14Q9BQ13 255 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-219ENST00000533953 ALG2Q9H553 416 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 BCO1Q9HAY6 547 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 KLHL9Q9P2J3 617 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 SNX13Q9Y5W8 968 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 CACNA1DQ01668 2161 aa11.89□□□□□ -0.51
CMTM1-219ENST00000533953 A0A087WUJ7 227 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 TUBAL3A6NHL2 446 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 FTCDNL1E5RQL4 147 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 AHSA1O95433 338 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 ZNF682O95780 498 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 GPIP06744 558 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 FKBP2P26885 142 aaKnown RBP11.88□□□□□ -0.51
CMTM1-219ENST00000533953 P2RY4P51582 365 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 CRYBG3Q68DQ2 2970 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 C6orf89Q6UWU4 347 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 KIF18BQ86Y91 864 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 STK35Q8TDR2 534 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 ADAMTS16Q8TE57 1224 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 DNAJA4Q8WW22 397 aaPredicted RBP11.88□□□□□ -0.51
CMTM1-219ENST00000533953 SLC38A4Q969I6 547 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms