RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 KHSRPQ92945 711 aaKnown RBP eCLIP7.1□□□□□ -1.274e-7■■□□□ 12.3
CTNND1-233ENST00000532787 MED30Q96HR3 178 aa7.1□□□□□ -1.27
CTNND1-233ENST00000532787 SLC6A18Q96N87 628 aa7.1□□□□□ -1.27
CTNND1-233ENST00000532787 SYT17Q9BSW7 474 aa7.1□□□□□ -1.27
CTNND1-233ENST00000532787 SYT11Q9BT88 431 aa7.1□□□□□ -1.27
CTNND1-233ENST00000532787 NIT2Q9NQR4 276 aa7.1□□□□□ -1.27
CTNND1-233ENST00000532787 SMCO4Q9NRQ5 59 aa7.1□□□□□ -1.27
CTNND1-233ENST00000532787 PPP1R14DQ9NXH3 145 aa7.1□□□□□ -1.27
CTNND1-233ENST00000532787 GMPR2Q9P2T1 348 aaKnown RBP7.1□□□□□ -1.27
CTNND1-233ENST00000532787 TRDV1A0A1B0GX56 115 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 F5H5K5 113 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 F6UZH7 168 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 MAGEB4O15481 346 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 STK17BO94768 372 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 BCKDHBP21953 392 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 GABRR1P24046 479 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 MSX1P28360 303 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 ZNF133P52736 654 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 RAB38P57729 211 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 GPLD1P80108 840 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 SORDQ00796 357 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 Q499Y3 187 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 OPN5Q6U736 354 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 FRMD1Q8N878 549 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 MDGA1Q8NFP4 955 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 ASB13Q8WXK3 278 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 TCTN2Q96GX1 697 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 RADILQ96JH8 1075 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 SLC41A2Q96JW4 573 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 OCSTAMPQ9BR26 566 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 KLF16Q9BXK1 252 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 HRH4Q9H3N8 390 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 ELOVL3Q9HB03 270 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 K7ERQ8 282 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 AQP9O43315 295 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 PIP5K1CO60331 668 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 GABARAPO95166 117 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 ITGB2P05107 769 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 HTR1FP30939 366 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 HOXA11P31270 313 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 SPOCK1Q08629 439 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 NR0B2Q15466 257 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 HIST2H3PS2Q5TEC6 136 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 TANGO2Q6ICL3 276 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 PLPP5Q8NEB5 264 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 SLC30A7Q8NEW0 376 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 OR9K2Q8NGE7 335 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 FBXO27Q8NI29 283 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 CHTF18Q8WVB6 975 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 PSMF1Q92530 271 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 LRFN5Q96NI6 719 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 CCNL2Q96S94 520 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 DUSP23Q9BVJ7 150 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 GDE1Q9NZC3 331 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 FTSJ1Q9UET6 329 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 MUTYHQ9UIF7 546 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 A8MVM7 634 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 RFXAPO00287 272 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 TMEM127O75204 238 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 DFFBO76075 338 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 LALBAP00709 142 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 HTR2CP28335 458 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 GDNFP39905 211 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 SLC1A3P43003 542 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 ZXDBP98169 803 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 TAGLNQ01995 201 aaKnown RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 ACSM1Q08AH1 577 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 ZNF684Q5T5D7 378 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 IER5LQ5T953 404 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 FAM122BQ7Z309 247 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 ST7LQ8TDW4 575 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 SCARB1Q8WTV0 552 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 MITD1Q8WV92 249 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 CRB3Q9BUF7 120 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 C1orf198Q9H425 327 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 METTL17Q9H7H0 456 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 WDR76Q9H967 626 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 ISYNA1Q9NPH2 558 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 GJD2Q9UKL4 321 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 ATXN7L1Q9ULK2 861 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 SLC16A7O60669 478 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 HLA-HP01893 362 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 PIPP12273 146 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 ADRA1AP35348 466 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 PSMB10P40306 273 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 SNRPGP62308 76 aaKnown RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 RAB11AP62491 216 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 SIRPAP78324 504 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 HNRNPA1L2Q32P51 320 aaKnown RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 SYT6Q5T7P8 510 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 FCRLBQ6BAA4 426 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 MOB1BQ7L9L4 216 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 OR52E1Q8NGJ3 308 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 CPNE4Q96A23 557 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-233ENST00000532787 MOCOSQ96EN8 888 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 CSNK1G1Q9HCP0 422 aa7.09□□□□□ -1.27
CTNND1-233ENST00000532787 PTGESO14684 152 aa7.08□□□□□ -1.28
CTNND1-233ENST00000532787 AGPAT2O15120 278 aa7.08□□□□□ -1.28
CTNND1-233ENST00000532787 LAMTOR5O43504 91 aa7.08□□□□□ -1.28
CTNND1-233ENST00000532787 ZFAND5O76080 213 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms