RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 MLH3Q9UHC1 1453 aa4.68□□□□□ -1.66
ECHDC1-222ENST00000531967 PREX1Q8TCU6 1659 aa4.68□□□□□ -1.66
ECHDC1-222ENST00000531967 ARHGEF28Q8N1W1 1705 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-222ENST00000531967 NPIPA5A0A0B4J1W7 369 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 SRRM4A7MD48 611 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ZNF732B4DXR9 585 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 NPIPA5E9PKD4 350 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 CLDN34H7C241 214 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 RRHO14718 337 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 SH2D1BO14796 132 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 TAPBPO15533 448 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 HYAL3O43820 417 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 NXPH2O95156 264 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 IFNA5P01569 189 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 SNRPBP14678 240 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 CSNK1A1P48729 337 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 CLDN17P56750 224 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 SPCS3P61009 180 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 SRSF1Q07955 248 aaKnown RBP eCLIP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 MEF2DQ14814 521 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 GRM7Q14831 915 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ZCWPW2Q504Y3 356 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 APOBEC3HQ6NTF7 200 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 PGAP1Q75T13 922 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 BCDIN3DQ7Z5W3 292 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 NET1Q7Z628 596 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ARL14EPQ8N8R7 260 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 FGFBP3Q8TAT2 258 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 BADQ92934 168 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ZNF419Q96HQ0 510 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 PSD2Q9BQI7 771 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ALG8Q9BVK2 526 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 SLC22A4Q9H015 551 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ZNF703Q9H7S9 590 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ZFP64Q9NPA5 681 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 DIABLOQ9NR28 239 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 DCAF13Q9NV06 445 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 GPR83Q9NYM4 423 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 STOML2Q9UJZ1 356 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 FBXL3Q9UKT7 428 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ERGIC3Q9Y282 383 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 YTHDC2Q9H6S0 1430 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 FRMPD1Q5SYB0 1578 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 PIK3C2BO00750 1634 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 GNG14A0A1W2PPG7 69 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 OVOL3O00110 214 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 PI15O43692 258 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 MT-CO3P00414 261 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 OCM2P0CE71 109 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ADORA3P0DMS8 318 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 PSMC3P17980 439 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 AOC1P19801 751 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 GPR1P46091 355 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 GLUD2P49448 558 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 PEX3P56589 373 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 TMPRSS3P57727 454 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 HHEXQ03014 270 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 MESP2Q0VG99 397 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ZP4Q12836 540 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 VGLL4Q14135 290 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ATXN7L3Q14CW9 347 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ELAVL1Q15717 326 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 SLC36A2Q495M3 483 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 PHLDA2Q53GA4 152 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 DUPD1Q68J44 220 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 C3orf33Q6P1S2 294 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 Q6ZSR3 168 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 SMIM15Q7Z3B0 74 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 COX8CQ7Z4L0 72 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 CTU1Q7Z7A3 348 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 UEVLDQ8IX04 471 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ENTHD1Q8IYW4 607 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 PGAM4Q8N0Y7 254 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 CCDC71LQ8N9Z2 235 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 OR11H4Q8NGC9 324 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 OR6N2Q8NGY6 317 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 OR4Q3Q8NH05 313 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 SPPL2AQ8TCT8 520 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 AP3S1Q92572 193 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 C18orf25Q96B23 403 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 ZNF75AQ96N20 296 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 MCCC1Q96RQ3 725 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 RBBP8Q99708 897 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 PRRT1Q99946 306 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 SPATA25Q9BR10 227 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 UCK2Q9BZX2 261 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 OR51B5Q9H339 312 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 POPDC2Q9HBU9 364 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 HRASLSQ9HDD0 168 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 STARD5Q9NSY2 213 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 MAT2BQ9NZL9 334 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 POMT2Q9UKY4 750 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 MRPS28Q9Y2Q9 187 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 CAMSAP1Q5T5Y3 1602 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 POGZQ7Z3K3 1410 aa4.67□□□□□ -1.66
ECHDC1-222ENST00000531967 A0A1W2PP11 408 aa4.66□□□□□ -1.66
ECHDC1-222ENST00000531967 SERINC4A6NH21 518 aa4.66□□□□□ -1.66
ECHDC1-222ENST00000531967 FAM74A7A6NL05 159 aa4.66□□□□□ -1.66
ECHDC1-222ENST00000531967 SRRM3A6NNA2 597 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-222ENST00000531967 SIRPB1O00241 398 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms