RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 IL6P05231 212 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 IDO1P14902 403 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 UQCRBP14927 111 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 PTNP21246 168 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 CD40P25942 277 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 MVDP53602 400 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 GSTA3Q16772 222 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 PDCD4Q53EL6 469 aaKnown RBP13.87□□□□□ -0.19
CPSF1-205ENST00000531042 AGAP6Q5VW22 663 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 NXNQ6DKJ4 435 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 PAQR6Q6TCH4 344 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 ZNF440Q8IYI8 595 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 MGARPQ8TDB4 240 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 MAELQ96JY0 434 aaKnown RBP13.87□□□□□ -0.19
CPSF1-205ENST00000531042 HS6ST2Q96MM7 605 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 AMBRA1Q9C0C7 1298 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 BARX1Q9HBU1 254 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-205ENST00000531042 SLC7A10Q9NS82 523 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 RLIMQ9NVW2 624 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 P2RX2Q9UBL9 471 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 DCTN4Q9UJW0 460 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 ADAM21Q9UKJ8 722 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 PRDM4Q9UKN5 801 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 B3GALT5Q9Y2C3 310 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 DSPPQ9NZW4 1301 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 CRLF1O75462 422 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 SLC22A3O75751 556 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 ZCCHC18P0CG32 403 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 ETFAP13804 333 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 TTKP33981 857 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 ACAA2P42765 397 aaKnown RBP13.86□□□□□ -0.19
CPSF1-205ENST00000531042 SLC18A1P54219 525 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 DMTNQ08495 405 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 SPOCK1Q08629 439 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 NRF1Q16656 503 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 ATG16L1Q676U5 607 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 C11orf71Q6IPW1 123 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 SLC22A25Q6T423 547 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 ZNF836Q6ZNA1 936 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 VRK2Q86Y07 508 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 WDR31Q8NA23 367 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 OR52P1PQ8NH57 321 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 DHRS9Q9BPW9 319 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 CALML5Q9NZT1 146 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 UPB1Q9UBR1 384 aa13.86□□□□□ -0.19
CPSF1-205ENST00000531042 LIPT2A6NK58 231 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 M0R1B8 84 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 SSX4O60224 188 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 GPIP06744 558 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 TFPTP0C1Z6 253 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 GKN3PP0CG01 181 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 CXCR1P25024 350 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 CRATP43155 626 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 IRX1P78414 480 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-205ENST00000531042 CEACAM7Q14002 265 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 SLC9B1Q4ZJI4 515 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 LIN52Q52LA3 116 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 OTUD3Q5T2D3 398 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-205ENST00000531042 TSPO2Q5TGU0 170 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 C9orf135Q5VTT2 229 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 C17orf78Q8N4C9 275 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 TMEM99Q8N816 258 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 ZIC4Q8N9L1 334 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 C1orf162Q8NEQ5 155 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-205ENST00000531042 TMEM45BQ96B21 275 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 MDFIQ99750 246 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 SF3B5Q9BWJ5 86 aaKnown RBP13.85□□□□□ -0.19
CPSF1-205ENST00000531042 C1QTNF6Q9BXI9 259 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 CACNG6Q9BXT2 260 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 TPT1P8Q9HAU6 139 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 SLC17A5Q9NRA2 495 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 CBLN4Q9NTU7 201 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 ZIM2Q9NZV7 527 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 POU2F3Q9UKI9 436 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 FBN1P35555 2871 aaKnown RBP13.85□□□□□ -0.19
CPSF1-205ENST00000531042 PLCE1Q9P212 2302 aa13.85□□□□□ -0.19
CPSF1-205ENST00000531042 ANK3Q12955 4377 aaKnown RBP13.85□□□□□ -0.19
CPSF1-205ENST00000531042 CHD3Q12873 2000 aaKnown RBP13.85□□□□□ -0.19
CPSF1-205ENST00000531042 AQP7P3A6NL99 342 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 AKR7A3O95154 331 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 ANP32DO95626 131 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 BCHEP06276 602 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 CRISP3P54108 245 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 DSTNP60981 165 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 TGFBR3Q03167 851 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 OR7A5Q15622 319 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 GTDC1Q4AE62 458 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 WBP2NLQ6ICG8 309 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 B3GLCTQ6Y288 498 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 MSANTD1Q6ZTZ1 278 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 MAVSQ7Z434 540 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 FBXL14Q8N1E6 418 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 DEPDC4Q8N2C3 294 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 MUC15Q8N387 334 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 CADM2Q8N3J6 435 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 OR9K2Q8NGE7 335 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 SLC38A5Q8WUX1 472 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 ITCHQ96J02 903 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 ADAD1Q96M93 576 aaKnown RBP13.84□□□□□ -0.19
CPSF1-205ENST00000531042 RMND5AQ9H871 391 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms