RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 NHLRC3Q5JS37 347 aa10.65□□□□□ -0.7
USP35-207ENST00000530546 MANEAQ5SRI9 462 aa10.65□□□□□ -0.7
USP35-207ENST00000530546 SLC36A4Q6YBV0 504 aa10.65□□□□□ -0.7
USP35-207ENST00000530546 WDR88Q6ZMY6 472 aa10.65□□□□□ -0.7
USP35-207ENST00000530546 QSOX2Q6ZRP7 698 aa10.65□□□□□ -0.7
USP35-207ENST00000530546 MBOAT2Q6ZWT7 520 aa10.65□□□□□ -0.7
USP35-207ENST00000530546 LAPTM4BQ86VI4 370 aa10.65□□□□□ -0.7
USP35-207ENST00000530546 CLRN3Q8NCR9 226 aa10.65□□□□□ -0.7
USP35-207ENST00000530546 SPOCK3Q9BQ16 436 aa10.65□□□□□ -0.7
USP35-207ENST00000530546 GPR27Q9NS67 375 aa10.65□□□□□ -0.7
USP35-207ENST00000530546 MALT1Q9UDY8 824 aa10.65□□□□□ -0.7
USP35-207ENST00000530546 A0A087WV62 115 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 MEIKINA0A087WXM9 373 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 SLC22A23A1A5C7 686 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 FAM183AA6NL82 134 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 CFDP00746 253 aaPredicted RBP10.65□□□□□ -0.71
USP35-207ENST00000530546 GAAP10253 952 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 NKAIN2Q5VXU1 208 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 B3GLCTQ6Y288 498 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 CHMP1BQ7LBR1 199 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 UXS1Q8NBZ7 420 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 FANK1Q8TC84 345 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 NR4A3Q92570 626 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 RBM18Q96H35 190 aaKnown RBP10.65□□□□□ -0.71
USP35-207ENST00000530546 ISYNA1Q9NPH2 558 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 FANCFQ9NPI8 374 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 DUSP22Q9NRW4 184 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 HPF1Q9NWY4 346 aa10.65□□□□□ -0.71
USP35-207ENST00000530546 PRSS44E7EML9 344 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 TGFBR3LH3BV60 316 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 ZNF217O75362 1048 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 NID1P14543 1247 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 SSTR2P30874 369 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 MADCAM1Q13477 382 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 ELOCQ15369 112 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 HACD4Q5VWC8 232 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 SMARCD3Q6STE5 483 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 LHFPL3Q86UP9 236 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 BBS1Q8NFJ9 593 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 GATAD2BQ8WXI9 593 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 CNOT9Q92600 299 aaKnown RBP10.64□□□□□ -0.71
USP35-207ENST00000530546 MMABQ96EY8 250 aaPredicted RBP10.64□□□□□ -0.71
USP35-207ENST00000530546 ATF6BQ99941 703 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 C20orf141Q9NUB4 165 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 NUBP2Q9Y5Y2 271 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 TRAPPC13A5PLN9 417 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 GTPBP1O00178 669 aaKnown RBP10.64□□□□□ -0.71
USP35-207ENST00000530546 FOXS1O43638 330 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 THBS1P07996 1170 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 SLC35E2P0CK97 266 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 MAOAP21397 527 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 FPR3P25089 353 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 STAT5AP42229 794 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 MTNR1AP48039 350 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 CDH11P55287 796 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 RPL6Q02878 288 aaKnown RBP10.64□□□□□ -0.71
USP35-207ENST00000530546 ZFP41Q8N8Y5 198 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 TM9SF4Q92544 642 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 ATOH1Q92858 354 aaPredicted RBP10.64□□□□□ -0.71
USP35-207ENST00000530546 OSTF1Q92882 214 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 PTCHD1Q96NR3 888 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 PRSS27Q9BQR3 290 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 HDHD2Q9H0R4 259 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 SLC2A4RGQ9NR83 387 aa10.64□□□□□ -0.71
USP35-207ENST00000530546 SPIN1Q9Y657 262 aaPredicted RBP10.64□□□□□ -0.71
USP35-207ENST00000530546 CDHR4A6H8M9 788 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 GNB5O14775 395 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 PRODHO43272 600 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 PEPDP12955 493 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 RNH1P13489 461 aaKnown RBP10.63□□□□□ -0.71
USP35-207ENST00000530546 CD27P26842 260 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 CD79BP40259 229 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 GCGRP47871 477 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 POLR2GP62487 172 aaKnown RBP eCLIP10.63□□□□□ -0.71
USP35-207ENST00000530546 EFNB1P98172 346 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 ZNF620Q6ZNG0 422 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 ABCA7Q8IZY2 2146 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 OR4F15Q8NGB8 312 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 PMM1Q92871 262 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 C1GALT1C1Q96EU7 318 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 SPACA7Q96KW9 195 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 STACQ99469 402 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 NPAS1Q99742 590 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 ANKRD19PQ9H560 264 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 NLGN3Q9NZ94 848 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 TESQ9UGI8 421 aaKnown RBP10.63□□□□□ -0.71
USP35-207ENST00000530546 DTX4Q9Y2E6 619 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 YARS2Q9Y2Z4 477 aaKnown RBP10.63□□□□□ -0.71
USP35-207ENST00000530546 METTL12A8MUP2 240 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 CASKO14936 926 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 BRINP1O60477 761 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 SULT1A3P0DMM9 295 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 SULT1A4P0DMN0 295 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 CXCL3P19876 107 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 MAKP20794 623 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 GABRA5P31644 462 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 ATP6V1E1P36543 226 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 CAPZBP47756 277 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 EMDP50402 254 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 TPBGQ13641 420 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms