RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 C9orf135Q5VTT2 229 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 SSX8Q7RTT4 187 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 ZNF440Q8IYI8 595 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 PIAS4Q8N2W9 510 aaPredicted RBP13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 CLIP4Q8N3C7 705 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 TMEM99Q8N816 258 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 MAPK1IP1LQ8NDC0 245 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 SLC38A5Q8WUX1 472 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 TRAF4Q9BUZ4 470 aaPredicted RBP13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 C1QTNF6Q9BXI9 259 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 SLC7A10Q9NS82 523 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 PARPBPQ9NWS1 579 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 TAS2R16Q9NYV7 291 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 CALML5Q9NZT1 146 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 UPB1Q9UBR1 384 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 ZNF443Q9Y2A4 671 aaPredicted RBP13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 SLC25A15Q9Y619 301 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 DSPPQ9NZW4 1301 aa13.35□□□□□ -0.27
EXOSC4-203ENST00000527954 INAFM1C9JVW0 142 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 RNF223E7ERA6 249 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 ERLIN1O75477 346 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 AKR7A3O95154 331 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 IGHV4-39P01824 125 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 ITGA5P08648 1049 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 PRG2P13727 222 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 ACVR1BP36896 505 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 ACAA2P42765 397 aaKnown RBP13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 MAP2K6P52564 334 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 CRISP3P54108 245 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 BNIP2Q12982 314 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 OR7A5Q15622 319 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 C6orf10Q5SRN2 563 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 BEND6Q5SZJ8 279 aaPredicted RBP13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 OTUD3Q5T2D3 398 aaPredicted RBP13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 TSPO2Q5TGU0 170 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 PAQR6Q6TCH4 344 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 TMEM108Q6UXF1 575 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 MSANTD1Q6ZTZ1 278 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 MIER2Q8N344 545 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 TMEM19Q96HH6 336 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 MUS81Q96NY9 551 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 SLCO5A1Q9H2Y9 848 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 ALG2Q9H553 416 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 GDF2Q9UK05 429 aaPredicted RBP13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 SLC9A8Q9Y2E8 581 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 USH1CQ9Y6N9 552 aa13.34□□□□□ -0.27
EXOSC4-203ENST00000527954 LIPT2A6NK58 231 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 M0R1B8 84 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 PDLIM1O00151 329 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 KLF11O14901 512 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 GPIP06744 558 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 NCF2P19878 526 aaPredicted RBP13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 COPZ1P61923 177 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 SPOCK1Q08629 439 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 LARS2Q15031 903 aaKnown RBP13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 WBP2NLQ6ICG8 309 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 OR7E24Q6IFN5 339 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 SLC2A7Q6PXP3 512 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 SLC22A25Q6T423 547 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 KLHL17Q6TDP4 642 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 DTX2Q86UW9 622 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 ZIC4Q8N9L1 334 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 GTF2H4Q92759 462 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 PAIP1Q9H074 479 aaKnown RBP13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 FAIMQ9NVQ4 179 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 POU2F3Q9UKI9 436 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 ZNF232Q9UNY5 417 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 CHST2Q9Y4C5 530 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 PCDHB14Q9Y5E9 798 aa13.33□□□□□ -0.28
EXOSC4-203ENST00000527954 USF3Q68DE3 2245 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 A0A0G2JPF8 293 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 FAM234BA2RU67 622 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 TMEM247A6NEH6 219 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 HNRNPCL2B2RXH8 293 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 HNRNPCL3B7ZW38 293 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 E7EQL1 145 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 HNRNPCL1O60812 293 aaKnown RBP13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 THBS1P07996 1170 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 NUDT7P0C024 238 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 HNRNPCL4P0DMR1 293 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 PTAFRP25105 342 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 CD40P25942 277 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 PPP2R2BQ00005 443 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 ETFDHQ16134 617 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 RNF220Q5VTB9 566 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 AGAP6Q5VW22 663 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 EPGNQ6UW88 154 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 AAED1Q7RTV5 226 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 WDR31Q8NA23 367 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 OR9K2Q8NGE7 335 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 RADILQ96JH8 1075 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 ZNF385AQ96PM9 386 aaKnown RBP13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 SPATA9Q9BWV2 254 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 REG4Q9BYZ8 158 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 GRIP2Q9C0E4 1043 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 ADPRHL2Q9NX46 363 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 THUMPD1Q9NXG2 353 aaKnown RBP13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 DCTN4Q9UJW0 460 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 MGAT4BQ9UQ53 548 aa13.32□□□□□ -0.28
EXOSC4-203ENST00000527954 B3GALT5Q9Y2C3 310 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms