RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PIGTQ969N2 578 aa29.23■■■□□ 2.27
SSSCA1-205ENST00000527920 APH1AQ96BI3 265 aa29.23■■■□□ 2.27
SSSCA1-205ENST00000527920 MTORP42345 2549 aa29.23■■■□□ 2.27
SSSCA1-205ENST00000527920 TMEM229AB2RXF0 380 aa29.22■■■□□ 2.27
SSSCA1-205ENST00000527920 RAMP1O60894 148 aa29.22■■■□□ 2.27
SSSCA1-205ENST00000527920 SLC6A2P23975 617 aa29.22■■■□□ 2.27
SSSCA1-205ENST00000527920 SCARB2Q14108 478 aa29.22■■■□□ 2.27
SSSCA1-205ENST00000527920 SLC17A1Q14916 467 aa29.22■■■□□ 2.27
SSSCA1-205ENST00000527920 TSC22D1Q15714 1073 aa29.22■■■□□ 2.27
SSSCA1-205ENST00000527920 TAB1Q15750 504 aa29.22■■■□□ 2.27
SSSCA1-205ENST00000527920 ATG4DQ86TL0 474 aaPredicted RBP29.22■■■□□ 2.27
SSSCA1-205ENST00000527920 PLPPR2Q96GM1 343 aa29.22■■■□□ 2.27
SSSCA1-205ENST00000527920 SLC9A8Q9Y2E8 581 aa29.22■■■□□ 2.27
SSSCA1-205ENST00000527920 ROS1P08922 2347 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 PRORSD1PA6NEY8 169 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 NPIPB7O75200 414 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 RETREG3Q86VR2 466 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 P2RY8Q86VZ1 359 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 BHLHE22Q8NFJ8 381 aaPredicted RBP29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 STK35Q8TDR2 534 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 ANKRD27Q96NW4 1050 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 CGREF1Q99674 301 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 TMUB1Q9BVT8 246 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 SF3B5Q9BWJ5 86 aaKnown RBP29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 PIF1Q9H611 641 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 UBTD1Q9HAC8 227 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 C12orf10Q9HB07 376 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 MALT1Q9UDY8 824 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 FLVCR1Q9Y5Y0 555 aa29.21■■■□□ 2.27
SSSCA1-205ENST00000527920 MRPL33O75394 65 aaKnown RBP29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 TROVE2P10155 538 aaKnown RBP eCLIP29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 IGHV1-2P23083 117 aa29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 CEACAM7Q14002 265 aa29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 C6orf89Q6UWU4 347 aa29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 ZNF704Q6ZNC4 412 aaPredicted RBP29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 LSMEM1Q8N8F7 131 aa29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 HIPK4Q8NE63 616 aa29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 ZNF607Q96SK3 696 aa29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 TMEM120AQ9BXJ8 343 aa29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 RSPO3Q9BXY4 272 aaPredicted RBP29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 PARPBPQ9NWS1 579 aa29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 MAP1AP78559 2803 aaPredicted RBP29.2■■■□□ 2.26
SSSCA1-205ENST00000527920 PRR14LQ5THK1 2151 aa29.19■■■□□ 2.26
SSSCA1-205ENST00000527920 LYZL6O75951 148 aa29.19■■■□□ 2.26
SSSCA1-205ENST00000527920 NTF4P34130 210 aa29.19■■■□□ 2.26
SSSCA1-205ENST00000527920 RBBP4Q09028 425 aa29.19■■■□□ 2.26
SSSCA1-205ENST00000527920 OTUD3Q5T2D3 398 aaPredicted RBP29.19■■■□□ 2.26
SSSCA1-205ENST00000527920 C1orf140Q5VVS0 124 aa29.19■■■□□ 2.26
SSSCA1-205ENST00000527920 TAPBPLQ9BX59 468 aa29.19■■■□□ 2.26
SSSCA1-205ENST00000527920 EVA1AQ9H8M9 152 aa29.19■■■□□ 2.26
SSSCA1-205ENST00000527920 AQP7P3A6NL99 342 aa29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 FRS3O43559 492 aa29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 SERPINB7O75635 380 aa29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 BNIP2Q12982 314 aa29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 OR7A5Q15622 319 aa29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 TIMM23BQ5SRD1 257 aa29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 SEZ6L2Q6UXD5 910 aa29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 ZC3HAV1Q7Z2W4 902 aaKnown RBP29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 LRRC75A-AS1Q8N1F1 130 aa29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 ZNF433Q8N7K0 673 aaPredicted RBP29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 C11orf65Q8NCR3 313 aa29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 TMEM45BQ96B21 275 aa29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 ANGPT4Q9Y264 503 aa29.18■■■□□ 2.26
SSSCA1-205ENST00000527920 GGT1P19440 569 aa29.17■■■□□ 2.26
SSSCA1-205ENST00000527920 ADSLP30566 484 aaPredicted RBP29.17■■■□□ 2.26
SSSCA1-205ENST00000527920 HOXC12P31275 282 aa29.17■■■□□ 2.26
SSSCA1-205ENST00000527920 ADAM8P78325 824 aa29.17■■■□□ 2.26
SSSCA1-205ENST00000527920 ESRP2Q9H6T0 727 aaKnown RBP29.17■■■□□ 2.26
SSSCA1-205ENST00000527920 ASB6Q9NWX5 421 aa29.17■■■□□ 2.26
SSSCA1-205ENST00000527920 RAI1Q7Z5J4 1906 aaPredicted RBP29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 VAMP5O95183 116 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 CD99P14209 185 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 PCBP3P57721 371 aaKnown RBP29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 HOXC5Q00444 222 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 NFYCQ13952 458 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 NCMAPQ5T1S8 102 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 ADAM5Q6NVV9 412 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 NET1Q7Z628 596 aaPredicted RBP29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 PTOV1Q86YD1 416 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 UBE2J2Q8N2K1 259 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 TMEM99Q8N816 258 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 DNAJA4Q8WW22 397 aaPredicted RBP29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 CCL19Q99731 98 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 TRIM2Q9C040 744 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 FGFR1OP2Q9NVK5 253 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 TAS2R16Q9NYV7 291 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 RPS6KB2Q9UBS0 482 aa29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 TESQ9UGI8 421 aaKnown RBP29.16■■■□□ 2.26
SSSCA1-205ENST00000527920 OR5H1A6NKK0 313 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 TMCC2O75069 709 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 FZD7O75084 574 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 AKR7A3O95154 331 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 AHSA1O95433 338 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 C5orf46Q6UWT4 87 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 CASP12Q6UXS9 341 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 COMTD1Q86VU5 262 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 OR9K2Q8NGE7 335 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 MFSD8Q8NHS3 518 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 MUCL1Q96DR8 90 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 CCDC134Q9H6E4 229 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms