RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 TRBV5-3A0A0A0MS03 114 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 CIB4A0PJX0 185 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 CCT8L1PA6NM43 557 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 CLOCKO15516 846 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 VIMP08670 466 aaKnown RBP13.74□□□□□ -0.21
CAPN1-213ENST00000527897 TROVE2P10155 538 aaKnown RBP eCLIP13.74□□□□□ -0.21
CAPN1-213ENST00000527897 ETS2P15036 469 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 IGHV1-2P23083 117 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 LOXP28300 417 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-213ENST00000527897 MAP2K6P52564 334 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 MTPNP58546 118 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 FAPQ12884 760 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 NFYCQ13952 458 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 PDK3Q15120 406 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 CYP51A1Q16850 503 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 DLEU7Q6UYE1 221 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 GPAT4Q86UL3 456 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 TMEM99Q8N816 258 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 HSD17B8Q92506 261 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 SIKE1Q9BRV8 207 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 SPATA5L1Q9BVQ7 753 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 ZNF385DQ9H6B1 395 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 FGFR1OP2Q9NVK5 253 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 ZNF446Q9NWS9 450 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 SLC13A4Q9UKG4 626 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 ROS1P08922 2347 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 LIPT2A6NK58 231 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 ELOA3DA6NLF2 546 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-213ENST00000527897 A8MVM7 634 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 TPST1O60507 370 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 SMPD2O60906 423 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 RAD51DO75771 328 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 NCALDP61601 193 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 ELOA3BQ3SY89 546 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 GLIPR1L2Q4G1C9 344 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 HSP90B2PQ58FF3 399 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 RUNDC3AQ59EK9 446 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 C9orf135Q5VTT2 229 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 C1orf140Q5VVS0 124 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 FBXW9Q5XUX1 488 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 PAQR6Q6TCH4 344 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 ATG4DQ86TL0 474 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-213ENST00000527897 RETREG3Q86VR2 466 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 ELOA3Q8NG57 546 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 STON2Q8WXE9 905 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 C3orf49Q96BT1 292 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 SLC25A36Q96CQ1 311 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 ZNF607Q96SK3 696 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 POTEKPQ9BYX7 375 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 NGBQ9NPG2 151 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 BEX4Q9NWD9 120 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-213ENST00000527897 UPB1Q9UBR1 384 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 ANGPT4Q9Y264 503 aa13.73□□□□□ -0.21
CAPN1-213ENST00000527897 GPX2P18283 190 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 GGT1P19440 569 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 PRKAR1BP31321 381 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 NTF4P34130 210 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 SLC16A1P53985 500 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 ADAM8P78325 824 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 NKX6-1P78426 367 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-213ENST00000527897 H3F3AP84243 136 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 FOXD4Q12950 439 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-213ENST00000527897 SELPLGQ14242 412 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 PPA1Q15181 289 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 TMEM225Q6GV28 225 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 C20orf204Q6ZNR8 217 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 COMTD1Q86VU5 262 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 P3H2Q8IVL5 708 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 HIPK4Q8NE63 616 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 WFDC11Q8NEX6 87 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 OR52E4Q8NGH9 312 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 AKAP1Q92667 903 aaKnown RBP eCLIP13.72□□□□□ -0.21
CAPN1-213ENST00000527897 PIGTQ969N2 578 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 MUCL1Q96DR8 90 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 PERPQ96FX8 193 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 ANKRD27Q96NW4 1050 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 CGREF1Q99674 301 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 PRR14Q9BWN1 585 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 TMEM38AQ9H6F2 299 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 ESRP2Q9H6T0 727 aaKnown RBP13.72□□□□□ -0.21
CAPN1-213ENST00000527897 ASB6Q9NWX5 421 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 SLC9A8Q9Y2E8 581 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 FLVCR1Q9Y5Y0 555 aa13.72□□□□□ -0.21
CAPN1-213ENST00000527897 A0A1W2PR80 420 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 SERPINB7O75635 380 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 AHSA1O95433 338 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 OPN1SWP03999 348 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 CD3EP07766 207 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 COX5AP20674 150 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 GTF2E2P29084 291 aaKnown RBP13.71□□□□□ -0.21
CAPN1-213ENST00000527897 RPS5P46782 204 aaKnown RBP13.71□□□□□ -0.21
CAPN1-213ENST00000527897 ARFIP2P53365 341 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 RGS8P57771 180 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-213ENST00000527897 GUCY1A3Q02108 690 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 SLC17A1Q14916 467 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 ADRM1Q16186 407 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 METTL21CQ5VZV1 264 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 DHRS4L2Q6PKH6 230 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 AAED1Q7RTV5 226 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 ARMC8Q8IUR7 673 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms