RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CD5LO43866 347 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 KRT75O95678 551 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 THBS1P07996 1170 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 ITGA5P08648 1049 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 ALDOCP09972 364 aaKnown RBP19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 IMPDH2P12268 514 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 CDKN2CP42773 168 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 MAP2K6P52564 334 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 IRX1P78414 480 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 PLAURQ03405 335 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 LRRC74AQ0VAA2 488 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 COX20Q5RI15 118 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 MRPL2Q5T653 305 aaKnown RBP19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 NXNQ6DKJ4 435 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 HMBOX1Q6NT76 420 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 CLEC2AQ6UVW9 174 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 DNM1P46Q6ZS02 220 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 CXXC5Q7LFL8 322 aaKnown RBP19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 ANKRD42Q8N9B4 389 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 HTRA1Q92743 480 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 SLC7A10Q9NS82 523 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 FLVCR1Q9Y5Y0 555 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 PLCE1Q9P212 2302 aa19.66■□□□□ 0.74
TRAPPC4-208ENST00000527680 ZC3H12DA2A288 527 aaKnown RBP19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 SDHDO14521 159 aa19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 RFXANKO14593 260 aa19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 KITP10721 976 aa19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 BMP4P12644 408 aa19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 CDH2P19022 906 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 IL12AP29459 219 aa19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 CEACAM7Q14002 265 aa19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 OTUD3Q5T2D3 398 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 LSRQ86X29 649 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 ZNF440Q8IYI8 595 aa19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 WDR55Q9H6Y2 383 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 FKRPQ9H9S5 495 aa19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 RLIMQ9NVW2 624 aa19.65■□□□□ 0.74
TRAPPC4-208ENST00000527680 IGHV4-30-2A0A087WSY4 118 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 TRPC5OSA6NMA1 111 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 KRT33AO76009 404 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 AKR7A3O95154 331 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 IFNA2P01563 188 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 GPIP06744 558 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 EPHA3P29320 983 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 DSCR9P59020 149 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 COPZ1P61923 177 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 EPS8Q12929 822 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 SLC17A1Q14916 467 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 OR7A5Q15622 319 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 GSTA3Q16772 222 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 TSPO2Q5TGU0 170 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 TMEM225Q6GV28 225 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 PAQR6Q6TCH4 344 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 AAED1Q7RTV5 226 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 GPAT4Q86UL3 456 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 CADM2Q8N3J6 435 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 TMEM99Q8N816 258 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 WDR31Q8NA23 367 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 DCTN4Q9UJW0 460 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 AMDHD2Q9Y303 409 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 GPR45Q9Y5Y3 372 aa19.64■□□□□ 0.73
TRAPPC4-208ENST00000527680 A8MV72 311 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 FAAHO00519 579 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 GPRIN2O60269 458 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 ANP32DO95626 131 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 GKN3PP0CG01 181 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 CRATP43155 626 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 PRPS1P60891 318 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 CHRNB3Q05901 458 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 KLHL24Q6TFL4 600 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 HIPK1Q86Z02 1210 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 GLB1L3Q8NCI6 653 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 OR52P1PQ8NH57 321 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 SPATA3Q8NHX4 192 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 TAPBPLQ9BX59 468 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 ADAM19Q9H013 955 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 SLC17A5Q9NRA2 495 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 PMF1-BGLAPU3KQ54 211 aa19.63■□□□□ 0.73
TRAPPC4-208ENST00000527680 HDAC3O15379 428 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 WNT11O96014 354 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 IL6P05231 212 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 RPS4Y1P22090 263 aaKnown RBP19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 MPGP29372 298 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 C11orf71Q6IPW1 123 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 ZNF544Q6NX49 715 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 PODNL1Q6PEZ8 512 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 B3GLCTQ6Y288 498 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 CROCCP2Q86T23 111 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 VRK2Q86Y07 508 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 C17orf78Q8N4C9 275 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 C1orf162Q8NEQ5 155 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 OR10H5Q8NGA6 315 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 CACYBPQ9HB71 228 aaKnown RBP19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 THAP1Q9NVV9 213 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 ADPRHL2Q9NX46 363 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 CALML5Q9NZT1 146 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 P2RX2Q9UBL9 471 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 ZNF232Q9UNY5 417 aa19.62■□□□□ 0.73
TRAPPC4-208ENST00000527680 PDLIM1O00151 329 aa19.61■□□□□ 0.73
TRAPPC4-208ENST00000527680 SLC22A3O75751 556 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms