RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 C6orf136Q5SQH8 315 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 TSPO2Q5TGU0 170 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 IL23RQ5VWK5 629 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 FAM166AQ6J272 317 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 CASP12Q6UXS9 341 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 P2RY8Q86VZ1 359 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 CLECL1Q8IZS7 167 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 ZCCHC24Q8N2G6 241 aaKnown RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 FNDC5Q8NAU1 212 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 GLB1L3Q8NCI6 653 aaPredicted RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 PROX1Q92786 737 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 C3orf30Q96M34 536 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 MUS81Q96NY9 551 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 SORCS2Q96PQ0 1159 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 PRPF18Q99633 342 aaKnown RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 USB1Q9BQ65 265 aaKnown RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 NUF2Q9BZD4 464 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 GRIP2Q9C0E4 1043 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 SERHL2Q9H4I8 314 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 RABEP2Q9H5N1 569 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 AKTIPQ9H8T0 292 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 GP6Q9HCN6 339 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 HHATLQ9HCP6 504 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 TCF7L2Q9NQB0 619 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 SLC7A10Q9NS82 523 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 ACER3Q9NUN7 267 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 GPATCH2Q9NW75 528 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 LPAR3Q9UBY5 353 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 MALRD1Q5VYJ5 2156 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 ZNF716A6NP11 495 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 LYNX1G3V0Z9 82 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 NR5A2O00482 541 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 AP3D1O14617 1153 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 UBDO15205 165 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 SLC22A2O15244 555 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 UGT2B17O75795 530 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 IFI6P09912 130 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 LYNX1P0DP58 116 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 KITP10721 976 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 PGCP20142 388 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 COX5AP20674 150 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 PRPS1L1P21108 318 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 HPCAL1P37235 193 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 NR4A2P43354 598 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 ARFIP2P53365 341 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 AQP5P55064 265 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 SUMO3P55854 103 aaPredicted RBP5.75□□□□□ -1.49
CD44-221ENST00000526000 STX1BP61266 288 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 GNGT1P63211 74 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 CSNK2A1P68400 391 aaPredicted RBP5.75□□□□□ -1.49
CD44-221ENST00000526000 HBA1P69905 142 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 SKP2Q13309 424 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 LSM12Q3MHD2 195 aaKnown RBP5.75□□□□□ -1.49
CD44-221ENST00000526000 PDCD4Q53EL6 469 aaKnown RBP5.75□□□□□ -1.49
CD44-221ENST00000526000 LIPNQ5VXI9 398 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 OR4F3Q6IEY1 312 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 C3orf33Q6P1S2 294 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 TNFAIP8L2Q6P589 184 aaPredicted RBP5.75□□□□□ -1.49
CD44-221ENST00000526000 C16orf62Q7Z3J2 963 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 SLC46A3Q7Z3Q1 461 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 CPLX4Q7Z7G2 160 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 ANKRD46Q86W74 232 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 ADGRG3Q86Y34 549 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 OR56A1Q8NGH5 318 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 TMEM234Q8WY98 164 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 CNOT9Q92600 299 aaKnown RBP5.75□□□□□ -1.49
CD44-221ENST00000526000 ZHX1-C8orf76Q96EF9 292 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 AURKBQ96GD4 344 aaPredicted RBP5.75□□□□□ -1.49
CD44-221ENST00000526000 PIMREGQ9BSJ6 248 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 DUSP26Q9BV47 211 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 OR51I1Q9H343 314 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 OCEL1Q9H607 264 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 FKRPQ9H9S5 495 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 SLC17A5Q9NRA2 495 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 ATAD3AQ9NVI7 634 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 FGFR1OP2Q9NVK5 253 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 TAS2R16Q9NYV7 291 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 ZIM2Q9NZV7 527 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 EMC3Q9P0I2 261 aa5.75□□□□□ -1.49
CD44-221ENST00000526000 MARCOQ9UEW3 520 aaPredicted RBP5.75□□□□□ -1.49
CD44-221ENST00000526000 HEATR1Q9H583 2144 aaKnown RBP5.75□□□□□ -1.49
CD44-221ENST00000526000 A0A096LPE4 126 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 TMED7-TICAM2A0A0A6YYA0 188 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 A0A0G2JND7 137 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 RNF103-CHMP3A0A140T963 221 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 A0A1W2PPZ6 126 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 TMEM72A0PK05 275 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 ZC3H12DA2A288 527 aaKnown RBP5.74□□□□□ -1.49
CD44-221ENST00000526000 VWC2LB2RUY7 222 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 H7C417 338 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 GPR171O14626 319 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 WIPF1O43516 503 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 SNX3O60493 162 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 SCN2BO60939 215 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 STX11O75558 287 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 KRT33AO76009 404 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 AKR7A3O95154 331 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 LGI1O95970 557 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 FAM107AO95990 144 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 KRT16P08779 473 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms