RNA–Protein interactions for RNA: ENST00000524208.5

POLB-215, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-215ENST00000524208 LIMS1P48059 325 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 CLK3P49761 638 aaKnown RBP6.85□□□□□ -1.31
POLB-215ENST00000524208 P2RX1P51575 399 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 ZNF41P51814 821 aaPredicted RBP6.85□□□□□ -1.31
POLB-215ENST00000524208 DAZAP2Q15038 168 aaPredicted RBP6.85□□□□□ -1.31
POLB-215ENST00000524208 SF3B4Q15427 424 aaKnown RBP eCLIP6.85□□□□□ -1.31
POLB-215ENST00000524208 GPR68Q15743 365 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 ATG16L1Q676U5 607 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 NXNQ6DKJ4 435 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 SLC2A7Q6PXP3 512 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 PAMR1Q6UXH9 720 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 ESPNLQ6ZVH7 1005 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 C16orf62Q7Z3J2 963 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 P4HA3Q7Z4N8 544 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 MTERF4Q7Z6M4 381 aaKnown RBP6.85□□□□□ -1.31
POLB-215ENST00000524208 CDC20BQ86Y33 519 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 KIRREL3Q8IZU9 778 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 ZNF619Q8N2I2 560 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 CLRN3Q8NCR9 226 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 TOR1AIP2Q8NFQ8 470 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 RFWD2Q8NHY2 731 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 ZFP90Q8TF47 636 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 ROBO4Q8WZ75 1007 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 MRGPRX4Q96LA9 322 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 OR52E6Q96RD3 313 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 LAT2Q9GZY6 243 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 HOXD1Q9GZZ0 328 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 PAIP1Q9H074 479 aaKnown RBP6.85□□□□□ -1.31
POLB-215ENST00000524208 PIGMQ9H3S5 423 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 PLEKHF2Q9H8W4 249 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 KLHL28Q9NXS3 571 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 SLC25A37Q9NYZ2 338 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 ZIM2Q9NZV7 527 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 WDR45Q9Y484 360 aa6.85□□□□□ -1.31
POLB-215ENST00000524208 RAI1Q7Z5J4 1906 aaPredicted RBP6.85□□□□□ -1.31
POLB-215ENST00000524208 MED13LQ71F56 2210 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 SH3D21A4FU49 640 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 TUBAL3A6NHL2 446 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 AGAP5A6NIR3 686 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 RAMP1O60894 148 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 SLC22A3O75751 556 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 CYP7B1O75881 506 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 FCGR2AP12318 317 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 HPGDP15428 266 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 ENPP1P22413 925 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 UGT2B10P36537 528 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 SELENBP1Q13228 472 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 LCE4AQ5TA78 99 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 HBMQ6B0K9 141 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 ABLIM2Q6H8Q1 611 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 OR2A2Q6IF42 318 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 BHLHB9Q6PI77 547 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 TFAP2EQ6VUC0 442 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 ZNF836Q6ZNA1 936 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 PLEKHM3Q6ZWE6 761 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 NUFIP2Q7Z417 695 aaKnown RBP6.84□□□□□ -1.31
POLB-215ENST00000524208 LINC00482Q8N8I6 264 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 GLB1L3Q8NCI6 653 aaPredicted RBP6.84□□□□□ -1.31
POLB-215ENST00000524208 OR6K3Q8NGY3 331 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 XAGE5Q8WWM1 108 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 GTF2H4Q92759 462 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 MAL2Q969L2 176 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 FOXRED1Q96CU9 486 aaPredicted RBP6.84□□□□□ -1.31
POLB-215ENST00000524208 DTNBP1Q96EV8 351 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 DNAJA3Q96EY1 480 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 TRNT1Q96Q11 434 aaKnown RBP6.84□□□□□ -1.31
POLB-215ENST00000524208 PANX1Q96RD7 426 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 FOXB1Q99853 325 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 THUMPD3Q9BV44 507 aaKnown RBP6.84□□□□□ -1.31
POLB-215ENST00000524208 CCDC106Q9BWC9 280 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 OR11A1Q9GZK7 315 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 C6orf203Q9P0P8 240 aaPredicted RBP6.84□□□□□ -1.31
POLB-215ENST00000524208 ST6GALNAC2Q9UJ37 374 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 PLEKHA6Q9Y2H5 1048 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 PMF1-BGLAPU3KQ54 211 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 FN1P02751 2386 aaKnown RBP6.84□□□□□ -1.31
POLB-215ENST00000524208 CSPG4Q6UVK1 2322 aa6.84□□□□□ -1.31
POLB-215ENST00000524208 USF3Q68DE3 2245 aa6.84□□□□□ -1.32
POLB-215ENST00000524208 ARID1AO14497 2285 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 FAM234BA2RU67 622 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 ENO4A6NNW6 628 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 SLCO1B7G3V0H7 640 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 NR5A2O00482 541 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 RFXANKO14593 260 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 UBDO15205 165 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 EIF4E2O60573 245 aaKnown RBP6.83□□□□□ -1.32
POLB-215ENST00000524208 GCM2O75603 506 aaPredicted RBP6.83□□□□□ -1.32
POLB-215ENST00000524208 NUDT14O95848 222 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 TSPAN15O95858 294 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 CSTAP01040 98 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 FESP07332 822 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 ZCCHC18P0CG32 403 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 PRG2P13727 222 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 CD79BP40259 229 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 EIF1P41567 113 aaKnown RBP6.83□□□□□ -1.32
POLB-215ENST00000524208 PCYT1AP49585 367 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 POLR2JP52435 117 aaKnown RBP6.83□□□□□ -1.32
POLB-215ENST00000524208 IST1P53990 364 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 AQP5P55064 265 aa6.83□□□□□ -1.32
POLB-215ENST00000524208 EEFSECP57772 596 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms