RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 H7C417 338 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 AP3D1O14617 1153 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 NDUFS7O75251 213 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 RAD51DO75771 328 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 TFPTP0C1Z6 253 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 CDKN2CP42773 168 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 FOXG1P55316 489 aaPredicted RBP11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 WDR4P57081 412 aaKnown RBP11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 TGFBR3Q03167 851 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 DMTNQ08495 405 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 FAPQ12884 760 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 ELOA3BQ3SY89 546 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 HIPK1Q86Z02 1210 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 DEPDC4Q8N2C3 294 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 ELOA3Q8NG57 546 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 WDR60Q8WVS4 1066 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 HS6ST2Q96MM7 605 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 RHNO1Q9BSD3 238 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 INPP5KQ9BT40 448 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 KCNK9Q9NPC2 374 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 SLC17A5Q9NRA2 495 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 SLC7A10Q9NS82 523 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 THUMPD1Q9NXG2 353 aaKnown RBP11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 CALML5Q9NZT1 146 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 GDF2Q9UK05 429 aaPredicted RBP11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 AMDHD2Q9Y303 409 aa11.1□□□□□ -0.63
TOP1MT-217ENST00000523417 ABCA1O95477 2261 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 LIPT2A6NK58 231 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 NPIPB7O75200 414 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 SLC22A3O75751 556 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 VAMP5O95183 116 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 IGHV3-9P01782 118 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 TP53P04637 393 aaPredicted RBP11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 GPIP06744 558 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 NR2F1P10589 423 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 IDO1P14902 403 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 MPGP29372 298 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 IRX1P78414 480 aaPredicted RBP11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 PDCD4Q53EL6 469 aaKnown RBP11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 COX20Q5RI15 118 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 CEP85LQ5SZL2 805 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 MRPL2Q5T653 305 aaKnown RBP11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 TSPO2Q5TGU0 170 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 MSANTD1Q6ZTZ1 278 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 PEX5LQ8IYB4 626 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 MUC15Q8N387 334 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 POMGNT2Q8NAT1 580 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 OR52E4Q8NGH9 312 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 OR52N5Q8NH56 324 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 SLC35B4Q969S0 331 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 ZBTB18Q99592 522 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 OBP2BQ9NPH6 170 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 SDR39U1Q9NRG7 319 aaPredicted RBP11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 ATRQ13535 2644 aa11.09□□□□□ -0.63
TOP1MT-217ENST00000523417 COL6A5A8TX70 2615 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 A0A096LPI6 279 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 A0A0G2JPF8 293 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 ZC3H12DA2A288 527 aaKnown RBP11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 FAM234BA2RU67 622 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 OR6C65A6NJZ3 312 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 AQP7P3A6NL99 342 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 A8MVM7 634 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 HNRNPCL2B2RXH8 293 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 HNRNPCL3B7ZW38 293 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 RFXANKO14593 260 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 HNRNPCL1O60812 293 aaKnown RBP11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 FZD7O75084 574 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 HNRNPCL4P0DMR1 293 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 BMP4P12644 408 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 CCNA2P20248 432 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 CXCR1P25024 350 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 EPHA3P29320 983 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 APOBEC3AP31941 199 aaPredicted RBP11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 ZNF83P51522 516 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 P2RY4P51582 365 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 PRPS1P60891 318 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 LOXL1Q08397 574 aaPredicted RBP11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 RAB35Q15286 201 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 RNF220Q5VTB9 566 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 HHATQ5VTY9 493 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 PRAMEF8Q5VWM4 474 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 PRAMEF7Q5VXH5 474 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 WBP2NLQ6ICG8 309 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 SLC22A25Q6T423 547 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 CXXC5Q7LFL8 322 aaKnown RBP11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 FBXL14Q8N1E6 418 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 ANKK1Q8NFD2 765 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 OR52P1PQ8NH57 321 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 SLC38A5Q8WUX1 472 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 ZNF317Q96PQ6 595 aaPredicted RBP11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 WDR55Q9H6Y2 383 aaPredicted RBP11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 FKRPQ9H9S5 495 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 BCL2L10Q9HD36 194 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 SLC6A13Q9NSD5 602 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 TMEM160Q9NX00 188 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 ZIM2Q9NZV7 527 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 UPB1Q9UBR1 384 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 ZNF232Q9UNY5 417 aa11.08□□□□□ -0.64
TOP1MT-217ENST00000523417 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms