RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 INPP5JQ15735 1006 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 PCK2Q16822 640 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 SMIM21Q3B7S5 101 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 PPM1JQ5JR12 505 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 SH3PXD2AQ5TCZ1 1133 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 STPG1Q5TH74 334 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 PEAR1Q5VY43 1037 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 LYSMD4Q5XG99 296 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 MBLAC2Q68D91 279 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CGB2Q6NT52 195 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 HAGHLQ6PII5 290 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF517Q6ZMY9 492 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 TMPRSS7Q7RTY8 843 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 SCD5Q86SK9 330 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CALHM1Q8IU99 346 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 SYT12Q8IV01 421 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 GLB1L2Q8IW92 636 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 LRRC56Q8IYG6 542 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 PQLC1Q8N2U9 271 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 UXS1Q8NBZ7 420 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 C10orf82Q8WW14 230 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 HMGB4Q8WW32 186 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 GHSRQ92847 366 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CTHRC1Q96CG8 243 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CMBLQ96DG6 245 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CERS2Q96G23 380 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM19Q96HH6 336 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 RAX2Q96IS3 184 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 MS4A14Q96JA4 679 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 PANX3Q96QZ0 392 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 ERGIC2Q96RQ1 377 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 LPAR4Q99677 370 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 KCTD14Q9BQ13 255 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM121Q9BTD3 319 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CCDC32Q9BV29 185 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 TPSD1Q9BZJ3 242 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF350Q9GZX5 532 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CLMPQ9H6B4 373 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM9BQ9NQ34 198 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 OLAHQ9NV23 265 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 AHSPQ9NZD4 102 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 SAE1Q9UBE0 346 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 ZDHHC2Q9UIJ5 367 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CRLS1Q9UJA2 301 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 NPIPA1Q9UND3 350 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 DRG1Q9Y295 367 aaKnown RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 GSTK1Q9Y2Q3 226 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 ATG4BQ9Y4P1 393 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 PRSS21Q9Y6M0 314 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 NCOR2Q9Y618 2525 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 ASCC3Q8N3C0 2202 aaKnown RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 MED19A0JLT2 244 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 A8MWP6 167 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 OR11H12B2RN74 326 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 NPIPB9F8W1W9 429 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 GOSR2O14653 212 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 KIAA0513O60268 411 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 KHDRBS3O75525 346 aaKnown RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 KDM4BO94953 1096 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 IGHV2-5P01817 119 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 KLKB1P03952 638 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 SYPP08247 313 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 SPP1P10451 314 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 NELFEP18615 380 aaKnown RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 TNFRSF1AP19438 455 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 TAC1P20366 129 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 SERPINA2P20848 420 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 TBXA2RP21731 343 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 PBX1P40424 430 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 CD200P41217 278 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 FRKP42685 505 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 GCGRP47871 477 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 SLC6A11P48066 632 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 TDGF1P3P51864 188 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 EEFSECP57772 596 aaKnown RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 SNRPEP62304 92 aaKnown RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 LSM6P62312 80 aaKnown RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 PPP3R1P63098 170 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 DHODHQ02127 395 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 EMX1Q04741 257 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 PRKCDQ05655 676 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 RBPJQ06330 500 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 ADIGQ0VDE8 80 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 BST1Q10588 318 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 PMPCAQ10713 525 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 RAB31Q13636 194 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 BOP1Q14137 746 aaKnown RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 RAB39AQ14964 217 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 DUOXA1Q1HG43 343 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM41BQ5BJD5 291 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 LAMTOR1Q6IAA8 161 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 INO80CQ6PI98 192 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM92Q6UXU6 159 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 LINGO4Q6UY18 593 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 RBMS3Q6XE24 437 aaKnown RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 SSX7Q7RTT5 188 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 APTXQ7Z2E3 356 aaKnown RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 ADIPOR2Q86V24 386 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 CPNE8Q86YQ8 564 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 NLGN4XQ8N0W4 816 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms