RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 OR2T27Q8NH04 317 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 FAM3CQ92520 227 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 TNFRSF13CQ96RJ3 184 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 SLC5A10A0PJK1 596 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 CLEC2LP0C7M8 214 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 SSTR2P30874 369 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 SIRPAP78324 504 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 FAPQ12884 760 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 GPR18Q14330 331 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 CST9Q5W186 159 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 APH1BQ8WW43 257 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 ZIC5Q96T25 663 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 MAN2C1Q9NTJ4 1040 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 VDAC3Q9Y277 283 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 BRWD3Q6RI45 1802 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 PARP14Q460N5 1801 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 TRDV1A0A1B0GX56 115 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 PLPP1O14494 284 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 MMP11P24347 488 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 HTR1FP30939 366 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 HTR3AP46098 478 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 SLC26A5P58743 744 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 RRAS2P62070 204 aaPredicted RBP12.84□□□□□ -0.35
SYNPO-205ENST00000522122 CSNK1G2P78368 415 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 SQSTM1Q13501 440 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 LTB4RQ15722 352 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 ADAMTSL4Q6UY14 1074 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 CAMKMTQ7Z624 323 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 PRRT1Q99946 306 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 TMEM202A6NGA9 273 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 GAPDHSO14556 408 aaPredicted RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 CRTAPO75718 401 aaPredicted RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ALX3O95076 343 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 KNG1P01042 644 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 FPR3P25089 353 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 RAP2BP61225 183 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 LTBQ06643 244 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 CRMP1Q14194 572 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 FBXO46Q6PJ61 603 aaPredicted RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 C12orf45Q8N5I9 185 aaPredicted RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 PDXPQ96GD0 296 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF436Q9C0F3 470 aaPredicted RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 PRSS16Q9NQE7 514 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ATG4BQ9Y4P1 393 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 TNFRSF10AO00220 468 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 IFNA2P01563 188 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 PSMB1P20618 241 aaKnown RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 THBS2P35442 1172 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 TAS2R31P59538 309 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 RAB5BP61020 215 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 FAM78AQ5JUQ0 283 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 C3orf33Q6P1S2 294 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 SFXN4Q6P4A7 337 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 LYPD4Q6UWN0 246 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ABHD4Q8TB40 342 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 KATNB1Q9BVA0 655 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ANKRD19PQ9H560 264 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 CACNA1CQ13936 2221 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ACOD1A6NK06 481 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 SOCS6O14544 535 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 SEC14L5O43304 696 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 PEX14O75381 377 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 PRKRAO75569 313 aaKnown RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 OR8G3PP0DMU2 310 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 RAB3AP20336 220 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 NPR2P20594 1047 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 MAOBP27338 520 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ERVFC1P60507 584 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 YBX1P67809 324 aaKnown RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 MEF2DQ14814 521 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ABHD17CQ6PCB6 329 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 IL17RDQ8NFM7 739 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ARL11Q969Q4 196 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 WBP2Q969T9 261 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 RBM24Q9BX46 236 aaKnown RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ELOVL3Q9HB03 270 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ZFP57Q9NU63 452 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 SUSD2Q9UGT4 822 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 F5P12259 2224 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 CDHR4A6H8M9 788 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 SFTPDP35247 375 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 DLSTP36957 453 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ACY1Q03154 408 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 MRPL49Q13405 166 aaKnown RBP12.83□□□□□ -0.36
SYNPO-205ENST00000522122 DUSP6Q16828 381 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 SLC48A1Q6P1K1 146 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 TSSK4Q6SA08 328 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 DCUN1D4Q92564 292 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 C1GALT1Q9NS00 363 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 ICKQ9UPZ9 632 aa12.83□□□□□ -0.36
SYNPO-205ENST00000522122 TMEM129A0AVI4 362 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 F8W036 122 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 UBL3O95164 117 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 F13BP05160 661 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 BLOC1S1P78537 153 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 CREB3L2Q70SY1 520 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 TMEFF1Q8IYR6 380 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 OR51T1Q8NGJ9 327 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms