RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 SNTB1Q13884 538 aaKnown RBP16.4■□□□□ 0.22
SREK1-207ENST00000520058 C1orf140Q5VVS0 124 aa16.4■□□□□ 0.22
SREK1-207ENST00000520058 ZNF474Q6S9Z5 364 aaPredicted RBP16.4■□□□□ 0.22
SREK1-207ENST00000520058 HACD2Q6Y1H2 254 aa16.4■□□□□ 0.22
SREK1-207ENST00000520058 CCDC80Q76M96 950 aa16.4■□□□□ 0.22
SREK1-207ENST00000520058 ATG4DQ86TL0 474 aaPredicted RBP16.4■□□□□ 0.22
SREK1-207ENST00000520058 CALHM3Q86XJ0 350 aa16.4■□□□□ 0.22
SREK1-207ENST00000520058 ZNF100Q8IYN0 542 aa16.4■□□□□ 0.22
SREK1-207ENST00000520058 LRRC37BQ96QE4 947 aa16.4■□□□□ 0.22
SREK1-207ENST00000520058 KLHL4Q9C0H6 718 aa16.4■□□□□ 0.22
SREK1-207ENST00000520058 SH3D21A4FU49 640 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 FMO6PO60774 539 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 LGI1O95970 557 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 OPN1SWP03999 348 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 UGT2B10P36537 528 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 GZMMP51124 257 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 CEACAM7Q14002 265 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 OR7A5Q15622 319 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 GLIPR1L2Q4G1C9 344 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 SWT1Q5T5J6 900 aaKnown RBP16.39■□□□□ 0.21
SREK1-207ENST00000520058 ABLIM2Q6H8Q1 611 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 PAQR6Q6TCH4 344 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 LINC01560Q8TB33 94 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 LZICQ8WZA0 190 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 SLC38A4Q969I6 547 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 DNAJA3Q96EY1 480 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 EPYCQ99645 322 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 MCHR1Q99705 422 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 MED18Q9BUE0 208 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 HDHD5Q9BXW7 423 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 MYLK2Q9H1R3 596 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 PARPBPQ9NWS1 579 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 NOSIPQ9Y314 301 aaKnown RBP16.39■□□□□ 0.21
SREK1-207ENST00000520058 NBPF19A0A087WUL8 3843 aa16.39■□□□□ 0.21
SREK1-207ENST00000520058 A0A1B0GWA3 101 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 ELOVL7A1L3X0 281 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 GSTA4O15217 222 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 VAMP5O95183 116 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 BNIP2Q12982 314 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 DAZAP2Q15038 168 aaPredicted RBP16.38■□□□□ 0.21
SREK1-207ENST00000520058 OR1Q1Q15612 314 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 DUSP7Q16829 419 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 OTUD3Q5T2D3 398 aaPredicted RBP16.38■□□□□ 0.21
SREK1-207ENST00000520058 GKAP1Q5VSY0 366 aaPredicted RBP16.38■□□□□ 0.21
SREK1-207ENST00000520058 TMEM225Q6GV28 225 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 ZNF613Q6PF04 617 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 C6orf89Q6UWU4 347 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 MICU2Q8IYU8 434 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 ZNF583Q96ND8 569 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 ARHGDIGQ99819 225 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 USB1Q9BQ65 265 aaKnown RBP16.38■□□□□ 0.21
SREK1-207ENST00000520058 ADPRHL2Q9NX46 363 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 C6orf203Q9P0P8 240 aaPredicted RBP16.38■□□□□ 0.21
SREK1-207ENST00000520058 GPR52Q9Y2T5 361 aa16.38■□□□□ 0.21
SREK1-207ENST00000520058 IGKV3D-15A0A087WSY6 115 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 ZC3H12DA2A288 527 aaKnown RBP16.37■□□□□ 0.21
SREK1-207ENST00000520058 LIPT2A6NK58 231 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 A6NNC1 897 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 CYSRT1A8MQ03 144 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 MRPL33O75394 65 aaKnown RBP16.37■□□□□ 0.21
SREK1-207ENST00000520058 GMNNO75496 209 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 CNOT4O95628 575 aaKnown RBP16.37■□□□□ 0.21
SREK1-207ENST00000520058 IMPDH2P12268 514 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 CD247P20963 164 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 H3F3AP84243 136 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 MFSD13AQ14CX5 517 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 P2RY6Q15077 328 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 PIGWQ7Z7B1 504 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 TREML1Q86YW5 311 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 STEAP2Q8NFT2 490 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 MFSD8Q8NHS3 518 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 TAMM41Q96BW9 452 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 SF3B5Q9BWJ5 86 aaKnown RBP16.37■□□□□ 0.21
SREK1-207ENST00000520058 OR10A4Q9H209 315 aa16.37■□□□□ 0.21
SREK1-207ENST00000520058 TMEM229AB2RXF0 380 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 IFNA8P32881 189 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 OR3A2P47893 321 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 SLC16A1P53985 500 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 LIPEQ05469 1076 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 NRF1Q16656 503 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 LRRC23Q53EV4 343 aaPredicted RBP16.36■□□□□ 0.21
SREK1-207ENST00000520058 TFAP2EQ6VUC0 442 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 NUFIP2Q7Z417 695 aaKnown RBP16.36■□□□□ 0.21
SREK1-207ENST00000520058 SLC15A3Q8IY34 581 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 VANGL1Q8TAA9 524 aaPredicted RBP16.36■□□□□ 0.21
SREK1-207ENST00000520058 APH1AQ96BI3 265 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 LURAP1Q96LR2 239 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 ZNF300Q96RE9 604 aaPredicted RBP16.36■□□□□ 0.21
SREK1-207ENST00000520058 GPATCH1Q9BRR8 931 aaKnown RBP16.36■□□□□ 0.21
SREK1-207ENST00000520058 POLDIP3Q9BY77 421 aaKnown RBP16.36■□□□□ 0.21
SREK1-207ENST00000520058 NDE1Q9NXR1 346 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 SH3GLB1Q9Y371 365 aa16.36■□□□□ 0.21
SREK1-207ENST00000520058 NOTCH2Q04721 2471 aa16.35■□□□□ 0.21
SREK1-207ENST00000520058 TRAV36DV7A0A075B6V5 113 aa16.35■□□□□ 0.21
SREK1-207ENST00000520058 A0A087WUJ7 227 aa16.35■□□□□ 0.21
SREK1-207ENST00000520058 A0A0B4J2E0 115 aa16.35■□□□□ 0.21
SREK1-207ENST00000520058 A0A1B0GX12 115 aa16.35■□□□□ 0.21
SREK1-207ENST00000520058 CCT8L1PA6NM43 557 aa16.35■□□□□ 0.21
SREK1-207ENST00000520058 M0R3H8 397 aa16.35■□□□□ 0.21
SREK1-207ENST00000520058 GCM2O75603 506 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms