RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 OR5M11Q96RB7 305 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 MCCC2Q9HCC0 563 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 ANKRD10Q9NXR5 420 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 CLEC2DQ9UHP7 191 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 CPAMD8Q8IZJ3 1885 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 NDUFB5O43674 189 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 CD36P16671 472 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 BMP7P18075 431 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 SPCS2Q15005 226 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 OPN5Q6U736 354 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 OAFQ86UD1 273 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 P2RY8Q86VZ1 359 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 SLC15A4Q8N697 577 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 ZNF248Q8NDW4 579 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 HGDQ93099 445 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 TMCO6Q96DC7 493 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 SGTBQ96EQ0 304 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 SH3YL1Q96HL8 342 aaPredicted RBP13.17□□□□□ -0.3
CLN8-204ENST00000519254 CCNL2Q96S94 520 aaPredicted RBP13.17□□□□□ -0.3
CLN8-204ENST00000519254 BCL7BQ9BQE9 202 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 HINT3Q9NQE9 182 aaKnown RBP13.17□□□□□ -0.3
CLN8-204ENST00000519254 LSM2Q9Y333 95 aaKnown RBP13.17□□□□□ -0.3
CLN8-204ENST00000519254 A6NL46 340 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 ZNF891A8MT65 544 aaPredicted RBP13.16□□□□□ -0.3
CLN8-204ENST00000519254 HCRTR2O43614 444 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 EIF4E2O60573 245 aaKnown RBP13.16□□□□□ -0.3
CLN8-204ENST00000519254 PNMTP11086 282 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 ZNF182P17025 639 aaPredicted RBP13.16□□□□□ -0.3
CLN8-204ENST00000519254 NAGAP17050 411 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 KLHL22Q53GT1 634 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 ACER2Q5QJU3 275 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 BICRALQ6AI39 1079 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 ZNF367Q7RTV3 350 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 CPOQ8IVL8 374 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 LRRC17Q8N6Y2 441 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 BBS1Q8NFJ9 593 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 THAP4Q8WY91 577 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 PSMF1Q92530 271 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 RNFT2Q96EX2 444 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 IFT27Q9BW83 186 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 SLC19A3Q9BZV2 496 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 ADAM19Q9H013 955 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 FGF20Q9NP95 211 aaPredicted RBP13.16□□□□□ -0.3
CLN8-204ENST00000519254 KLRF1Q9NZS2 232 aa13.16□□□□□ -0.3
CLN8-204ENST00000519254 DIMT1Q9UNQ2 313 aaKnown RBP13.16□□□□□ -0.3
CLN8-204ENST00000519254 AKAP13Q12802 2813 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 C2orf72A6NCS6 295 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 ELOA3DA6NLF2 546 aaPredicted RBP13.15□□□□□ -0.3
CLN8-204ENST00000519254 SNTNA6NMZ2 147 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 LRRN3E7EW58 273 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 F10P00742 488 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 SLC1A3P43003 542 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 SLC6A8P48029 635 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 MTNR1AP48039 350 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 RRADP55042 308 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 FOXK2Q01167 660 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 RAB40BQ12829 278 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 CDC20Q12834 499 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 NTRK2Q16620 822 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 ZNF791Q3KP31 576 aaPredicted RBP13.15□□□□□ -0.3
CLN8-204ENST00000519254 ELOA3BQ3SY89 546 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 ARMCX4Q5H9R4 360 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 ZNF362Q5T0B9 420 aaPredicted RBP13.15□□□□□ -0.3
CLN8-204ENST00000519254 SLC35F1Q5T1Q4 408 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 H3F3CQ6NXT2 135 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 JMJD6Q6NYC1 403 aaPredicted RBP13.15□□□□□ -0.3
CLN8-204ENST00000519254 PAQR6Q6TCH4 344 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 RTL4Q6ZR62 310 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 NUP54Q7Z3B4 507 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 SLC46A3Q7Z3Q1 461 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 BEST3Q8N1M1 668 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 NANOGP1Q8N7R0 232 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 ELOA3Q8NG57 546 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 TMEM43Q9BTV4 400 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 TAPBPLQ9BX59 468 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 METTL7AQ9H8H3 244 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 GALNT9Q9HCQ5 603 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 HPF1Q9NWY4 346 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 FREM2Q5SZK8 3169 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 EML6Q6ZMW3 1958 aa13.15□□□□□ -0.3
CLN8-204ENST00000519254 FAM183AA6NL82 134 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 APOL3O95236 402 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 RAB36O95755 333 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 ENDOUP21128 410 aaKnown RBP13.15□□□□□ -0.31
CLN8-204ENST00000519254 CDH11P55287 796 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 MED22Q15528 200 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 TOMM34Q15785 309 aaPredicted RBP13.15□□□□□ -0.31
CLN8-204ENST00000519254 ZNF468Q5VIY5 522 aaPredicted RBP13.15□□□□□ -0.31
CLN8-204ENST00000519254 NXNL2Q5VZ03 156 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 GALNT16Q8N428 558 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 ZNF563Q8TA94 476 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 TTC9Q92623 222 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 RPL3LQ92901 407 aaKnown RBP13.15□□□□□ -0.31
CLN8-204ENST00000519254 RFKQ969G6 155 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 MGLLQ99685 303 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 FN3KQ9H479 309 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 CMC2Q9NRP2 79 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 STMN3Q9NZ72 180 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 TEKT2Q9UIF3 430 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 POLHQ9Y253 713 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms