RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 PRSS27Q9BQR3 290 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 TTYH2Q9BSA4 534 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 SELENONQ9NZV5 590 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 SEC14L4Q9UDX3 406 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 RIMS3Q9UJD0 308 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 POMPQ9Y244 141 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 SLC5A6Q9Y289 635 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 PHF3Q92576 2039 aaKnown RBP8.78□□□□□ -1
TOPBP1-209ENST00000513818 DOCK7Q96N67 2140 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 A0A087WUJ7 227 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 A0A0G2JNJ9 132 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 A0A1B0GUH1 482 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 GJE1A6NN92 205 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 FAM90A27PA6NNH2 459 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 AHRRA9YTQ3 701 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 E9PLN8 166 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 FFAR1O14842 300 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 SMAD9O15198 467 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 ADAMDEC1O15204 470 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 RAMP1O60894 148 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 PRSS23O95084 383 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 OR5F1O95221 314 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 AHSA1O95433 338 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 SYNGR4O95473 234 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 ENPP1P22413 925 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 IDUAP35475 653 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 RASSF2P50749 326 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 CARD18P57730 90 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 KCNC4Q03721 635 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 GABPB1Q06547 395 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 FOXF2Q12947 444 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 OR7A5Q15622 319 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF239Q16600 458 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 C1orf140Q5VVS0 124 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 NSUN5P2Q63ZY6 315 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF613Q6PF04 617 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 ULK3Q6PHR2 472 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 ADGRE4PQ86SQ3 457 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 PFN4Q8NHR9 129 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 ABHD3Q8WU67 409 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 DNAJA4Q8WW22 397 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 SLC38A4Q969I6 547 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 SLC25A36Q96CQ1 311 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 DDIT4LQ96D03 193 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 C7orf34Q96L11 122 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF300Q96RE9 604 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 VKORC1Q9BQB6 163 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 PTDSS2Q9BVG9 487 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 PRRG4Q9BZD6 226 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 TRIM15Q9C019 465 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 MUC13Q9H3R2 512 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 MAN2C1Q9NTJ4 1040 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 NDUFAF4Q9P032 175 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 KLHL13Q9P2N7 655 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 Q9UFV3 132 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 AURKCQ9UQB9 309 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 RNF6Q9Y252 685 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 TESMINQ9Y4I5 508 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 ENPP4Q9Y6X5 453 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 MYO7BQ6PIF6 2116 aa8.77□□□□□ -1.01
TOPBP1-209ENST00000513818 HELZ2Q9BYK8 2649 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 NCOA6Q14686 2063 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 MBD3L4A6NDZ8 208 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 MBD3L3A6NE82 208 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 ERICH4A6NGS2 130 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 MBD3L5A6NJ08 208 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 CD8B2A6NJW9 211 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 A8MVM7 634 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 ANKRD65E5RJM6 399 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 SULT2B1O00204 365 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF208O43345 1280 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 NPIPB7O75200 414 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 AKR7A3O95154 331 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 STAMBPO95630 424 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 FABP3P05413 133 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 PNMTP11086 282 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 FPR1P21462 350 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 PTGER4P35408 488 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 PER3P56645 1201 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 SPIBQ01892 262 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 LTBQ06643 244 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 PPP1R8Q12972 351 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 IQCCQ4KMZ1 466 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 FGD3Q5JSP0 725 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 PDSS1Q5T2R2 415 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 C1orf146Q5VVC0 180 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 TMPPEQ6ZT21 453 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 MED12LQ86YW9 2145 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 LIX1LQ8IVB5 337 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 CCDC103Q8IW40 242 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 ADGRG5Q8IZF4 528 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 OFCC1Q8IZS5 231 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 C10orf53Q8N6V4 93 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 MBD3L2Q8NHZ7 208 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 TAAR8Q969N4 342 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 CPNE4Q96A23 557 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF775Q96BV0 537 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 SDCCAG3Q96C92 435 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 INTS12Q96CB8 462 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms