RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 C1QL2Q7Z5L3 287 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 CARM1Q86X55 608 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 ADGRG3Q86Y34 549 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 CCNYL1Q8N7R7 359 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 OR5D16Q8NGK9 328 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 MAGEE2Q8TD90 523 aaPredicted RBP9.44□□□□□ -0.9
DDX41-216ENST00000513562 CKAP2Q8WWK9 683 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 BCL2L2Q92843 193 aaPredicted RBP9.44□□□□□ -0.9
DDX41-216ENST00000513562 ZNF385AQ96PM9 386 aaKnown RBP9.44□□□□□ -0.9
DDX41-216ENST00000513562 OR7D2Q96RA2 312 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 SLC6A7Q99884 636 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 NAA11Q9BSU3 229 aaPredicted RBP9.44□□□□□ -0.9
DDX41-216ENST00000513562 TPK1Q9H3S4 243 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 NARFLQ9H6Q4 476 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 G6PC2Q9NQR9 355 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 TREM2Q9NZC2 230 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 BAIAP2L1Q9UHR4 511 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 ZNF281Q9Y2X9 895 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 ZNF587BE7ETH6 402 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 POC1B-GALNT4F8VUJ3 575 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 SLC28A1O00337 649 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 NR5A2O00482 541 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 SCAMP2O15127 329 aaKnown RBP9.43□□□□□ -0.9
DDX41-216ENST00000513562 FCMRO60667 390 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 BCAS1O75363 584 aaPredicted RBP9.43□□□□□ -0.9
DDX41-216ENST00000513562 AK1P00568 194 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 GSTA1P08263 222 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 ARAFP10398 606 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 UROSP10746 265 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 IMPDH2P12268 514 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 ACHEP22303 614 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 LMO4P61968 165 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 RPL38P63173 70 aaKnown RBP9.43□□□□□ -0.9
DDX41-216ENST00000513562 TUBA1BP68363 451 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 TUBA4AP68366 448 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 GPR68Q15743 365 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 MAPK14Q16539 360 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 SPDYE7PQ495Y7 208 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 SLC9B1Q4ZJI4 515 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 RFTN2Q52LD8 501 aaPredicted RBP9.43□□□□□ -0.9
DDX41-216ENST00000513562 TIFABQ6ZNK6 161 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 TUBA1AQ71U36 451 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 AAED1Q7RTV5 226 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 R3HCC1LQ7Z5L2 792 aaKnown RBP9.43□□□□□ -0.9
DDX41-216ENST00000513562 MYPOPQ86VE0 399 aaPredicted RBP9.43□□□□□ -0.9
DDX41-216ENST00000513562 OR9K2Q8NGE7 335 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 OR2T11Q8NH01 316 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 ZNF563Q8TA94 476 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 SFXN5Q8TD22 340 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 OR5P2Q8WZ92 322 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 MOAP1Q96BY2 351 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 AURKBQ96GD4 344 aaPredicted RBP9.43□□□□□ -0.9
DDX41-216ENST00000513562 ALKBH3Q96Q83 286 aaPredicted RBP9.43□□□□□ -0.9
DDX41-216ENST00000513562 SF3B5Q9BWJ5 86 aaKnown RBP9.43□□□□□ -0.9
DDX41-216ENST00000513562 ZNF350Q9GZX5 532 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 NELFAQ9H3P2 528 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 ARMCX1Q9P291 453 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 ATP6V1HQ9UI12 483 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 PCDHGB4Q9UN71 923 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 TMED5Q9Y3A6 229 aa9.43□□□□□ -0.9
DDX41-216ENST00000513562 A0A096LPE4 126 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 IGHV2OR16-5A0A0B4J2B6 119 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 A0A1W2PPZ6 126 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 ZNF208O43345 1280 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 STX11O75558 287 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 BCL10O95999 233 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 HPXP02790 462 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 CELA3BP08861 270 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 LAMP1P11279 417 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 NEFHP12036 1026 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 CCNA2P20248 432 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 RYKP34925 604 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 HPCAL1P37235 193 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 TMEM33P57088 247 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 NAA20P61599 178 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 PLAURQ03405 335 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 OCLNQ16625 522 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 AP1ARQ63HQ0 302 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 CLEC6AQ6EIG7 209 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 RNF165Q6ZSG1 346 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 OLIG3Q7RTU3 272 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 LSRQ86X29 649 aaPredicted RBP9.42□□□□□ -0.9
DDX41-216ENST00000513562 BPIFB2Q8N4F0 458 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 OR7A2PQ8NGA2 310 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 OIT3Q8WWZ8 545 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 RDH5Q92781 318 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 DDIT4LQ96D03 193 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 CCDC126Q96EE4 140 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 TMPRSS13Q9BYE2 586 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 KCNF1Q9H3M0 494 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 SERHL2Q9H4I8 314 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 PIF1Q9H611 641 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 SLC52A3Q9NQ40 469 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 EXOSC3Q9NQT5 275 aaKnown RBP9.42□□□□□ -0.9
DDX41-216ENST00000513562 DDX28Q9NUL7 540 aaKnown RBP9.42□□□□□ -0.9
DDX41-216ENST00000513562 MKLN1Q9UL63 735 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 SLC35A3Q9Y2D2 325 aa9.42□□□□□ -0.9
DDX41-216ENST00000513562 TMED7-TICAM2A0A0A6YYA0 188 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 A0A0G2JMP0 313 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 A0A0X1KG70 313 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms