RNA–Protein interactions for RNA: ENST00000513418.1

SMAD5-208, Transcript of SMAD family member 5, humanhuman

TSL 5

Gene SMAD5, Length 523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-208ENST00000513418 IGLV3-27P01718 113 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 IGHV3-9P01782 118 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 APOC2P02655 101 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 RHOCP08134 193 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 FCGR3AP08637 254 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 WNT2P09544 360 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 HIST1H2AGP0C0S8 130 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 PSMC3P17980 439 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 POLR2EP19388 210 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 CCNCP24863 283 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 UCP1P25874 307 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 IL2RGP31785 369 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 FDFT1P37268 417 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 COILP38432 576 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 HSPA9P38646 679 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 CDKN2BP42772 138 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 NPY2RP49146 381 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 FNTAP49354 379 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 EIF3EP60228 445 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 DYNLT1P63172 113 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 NAAAQ02083 359 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 OGDHQ02218 1023 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 SLC25A11Q02978 314 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 CAV1Q03135 178 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 PPP1R8Q12972 351 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 EIF4EBP2Q13542 120 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 DPYSL3Q14195 570 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 DMC1Q14565 340 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 RFTN1Q14699 578 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 PAFAH1B3Q15102 231 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 ZNF239Q16600 458 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 PARP15Q460N3 678 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 MS4A13Q5J8X5 152 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 HIST2H2AA3Q6FI13 130 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 C8orf74Q6P047 294 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 CCDC137Q6PK04 289 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 MFSD7Q6UXD7 560 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 TPGS1Q6ZTW0 290 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 GET4Q7L5D6 327 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 PID1Q7Z2X4 250 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 AMZ2Q86W34 360 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 CDKL3Q8IVW4 592 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 IFT20Q8IY31 132 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 CNPY4Q8N129 248 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 UMODL1-AS1Q8N2C9 162 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 ATPAF2Q8N5M1 289 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 ARL10Q8N8L6 244 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 ITFG1Q8TB96 612 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 TFB1MQ8WVM0 346 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.2□□□□□ -2.066e-6■■■■■ 28.1
SMAD5-208ENST00000513418 RAPGEF5Q92565 580 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 FGF13Q92913 245 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 HIST1H2ACQ93077 130 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 ELSPBP1Q96BH3 223 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 ZNF707Q96C28 371 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 MSANTD3Q96H12 275 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 PKNOX2Q96KN3 472 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 CSPG4P5Q96PW8 444 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 PSMB7Q99436 277 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 VAT1Q99536 393 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 CDX2Q99626 313 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 COQ7Q99807 217 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 TTYH2Q9BSA4 534 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 RPP25Q9BUL9 199 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 SNRNP25Q9BV90 132 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 CARD6Q9BX69 1037 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 BBS2Q9BXC9 721 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 DDX47Q9H0S4 455 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 LRRC19Q9H756 370 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 C8orf33Q9H7E9 229 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 UBE2ZQ9H832 354 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 SP140LQ9H930 580 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 ELL3Q9HB65 397 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 FAM114A2Q9NRY5 505 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 STARD5Q9NSY2 213 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 NINJ2Q9NZG7 142 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 CNOT2Q9NZN8 540 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 ZNF581Q9P0T4 197 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 DEC1Q9P2X7 70 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 EPS15L1Q9UBC2 864 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 MTRF1LQ9UGC7 380 aaKnown RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 MLXQ9UH92 298 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 SUN2Q9UH99 717 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 IL20RAQ9UHF4 553 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 STOML2Q9UJZ1 356 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 EMCNQ9ULC0 261 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 VANGL2Q9ULK5 521 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 PACSIN2Q9UNF0 486 aaPredicted RBP2.2□□□□□ -2.06
SMAD5-208ENST00000513418 TFR2Q9UP52 801 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 PLA2G4CQ9UP65 541 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 ENTPD4Q9Y227 616 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 HEY1Q9Y5J3 304 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 CROCCQ5TZA2 2017 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 TRIOBPQ9H2D6 2365 aa2.2□□□□□ -2.06
SMAD5-208ENST00000513418 DOCK8Q8NF50 2099 aa2.19□□□□□ -2.06
SMAD5-208ENST00000513418 MIA3Q5JRA6 1907 aa2.19□□□□□ -2.06
SMAD5-208ENST00000513418 COL4A4P53420 1690 aaPredicted RBP2.19□□□□□ -2.06
SMAD5-208ENST00000513418 IGLV3-10A0A075B6K4 115 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms