RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 LYPD3O95274 346 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 AHSA1O95433 338 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 PMS2P2O95744 297 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 THY1P04216 161 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 H1F0P07305 194 aaKnown RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 STSP08842 583 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 HOXD4P09016 255 aaPredicted RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 TFPIP10646 304 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 CCNA2P20248 432 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 SHC1P29353 583 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 IDUAP35475 653 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 RBM34P42696 430 aaKnown RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 CA7P43166 264 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 YAP1P46937 504 aaKnown RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 EIF1AXP47813 144 aaKnown RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 DIO1P49895 249 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 SUCLG1P53597 346 aaKnown RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 CLDN15P56746 228 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 CLDN20P56880 219 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 SMIM11AP58511 58 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 RAC3P60763 192 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 ACTR3P61158 418 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 CSNK2A1P68400 391 aaPredicted RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 SPIBQ01892 262 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 SRYQ05066 204 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 EGR4Q05215 589 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 MYBPHQ13203 477 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 MRPL49Q13405 166 aaKnown RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 CCNIQ14094 377 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 DGCR6Q14129 220 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 C3AR1Q16581 482 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 SGCBQ16585 318 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 TMEM176BQ3YBM2 270 aaPredicted RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 GXYLT1Q4G148 440 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 EMC4Q5J8M3 183 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 FAM69AQ5T7M9 428 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 HBMQ6B0K9 141 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 ZNF585AQ6P3V2 769 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 TTC33Q6PID6 262 aaPredicted RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 LINC00114Q6XXX2 140 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 TMPPEQ6ZT21 453 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 CHMP1BQ7LBR1 199 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 NKAIN4Q8IVV8 208 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 C10orf67Q8IYJ2 551 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 PAPD5Q8NDF8 572 aaKnown RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 PIK3C3Q8NEB9 887 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 OR10D3Q8NH80 312 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 OR2V1Q8NHB1 315 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 ZPLD1Q8TCW7 415 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 GTPBP3Q969Y2 492 aaKnown RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 CPNE4Q96A23 557 aaPredicted RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 DUS3LQ96G46 650 aaKnown RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 ARL5BQ96KC2 179 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 DHRS1Q96LJ7 313 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 HS6ST2Q96MM7 605 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 EPYCQ99645 322 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 PIP5K1AQ99755 562 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 PRSS27Q9BQR3 290 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 POTEKPQ9BYX7 375 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 SLC19A3Q9BZV2 496 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 KLHL4Q9C0H6 718 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 NMNAT1Q9HAN9 279 aaPredicted RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 TIGARQ9NQ88 270 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 PNPLA3Q9NST1 481 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 MAN2C1Q9NTJ4 1040 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 CCM2LQ9NUG4 571 aaPredicted RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 CLCF1Q9UBD9 225 aa6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 MCTS1Q9ULC4 181 aaKnown RBP6.81□□□□□ -1.32
HMGXB3-204ENST00000513318 IGKV1D-42A0A075B6H8 117 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 TRAV36DV7A0A075B6V5 113 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 TRGV8A0A0C4DH27 118 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ZC3H12DA2A288 527 aaKnown RBP6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 HTR3EA5X5Y0 456 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 CD8B2A6NJW9 211 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 CLCA1A8K7I4 914 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 H0YC42 278 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 OR2T1O43869 369 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 CXCL13O43927 109 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 EIF1BO60739 113 aaKnown RBP6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 FZD7O75084 574 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 FKBP6O75344 327 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 KRT36O76013 467 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 GADD45GO95257 159 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 SYNGR4O95473 234 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 MT-ATP6P00846 226 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 IGF2P01344 180 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 MT-ND1P03886 318 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 OPN1LWP04000 364 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 FCGR2AP12318 317 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ACVR2AP27037 513 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 RRM2P31350 389 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ERFP50548 548 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 TPD52P55327 224 aaPredicted RBP6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 GK3PQ14409 553 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 KPNB1Q14974 876 aaKnown RBP6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 MFSD13AQ14CX5 517 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 IGFBP7Q16270 282 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ZNF239Q16600 458 aaKnown RBP6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ACSF3Q4G176 576 aaPredicted RBP6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ARSJQ5FYB0 599 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms