RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 TMPRSS11FQ6ZWK6 438 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 GGNQ86UU5 652 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 CDK20Q8IZL9 346 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 FAR1Q8WVX9 515 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 ABTB1Q969K4 478 aaPredicted RBP11.28□□□□□ -0.6
PDPN-210ENST00000513143 TAAR8Q969N4 342 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 EME1Q96AY2 570 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 SDCCAG3Q96C92 435 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 SNRNP40Q96DI7 357 aaKnown RBP11.28□□□□□ -0.6
PDPN-210ENST00000513143 BPIFA2Q96DR5 249 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 KLHL15Q96M94 604 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 GPR137Q96N19 417 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 FEVQ99581 238 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 C9orf16Q9BUW7 83 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 PTDSS2Q9BVG9 487 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 OSBPL10Q9BXB5 764 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 DGCR6LQ9BY27 220 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 EXO5Q9H790 373 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 TMEM185BQ9H7F4 350 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 KRCC1Q9NPI7 259 aaPredicted RBP11.28□□□□□ -0.6
PDPN-210ENST00000513143 MGAT4BQ9UQ53 548 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 TMEM5Q9Y2B1 443 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 HDGFL3Q9Y3E1 203 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 SPTA1P02549 2419 aa11.27□□□□□ -0.6
PDPN-210ENST00000513143 A0A0J9YW62 118 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 KLF4O43474 513 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 OR2T1O43869 369 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 FZD7O75084 574 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 AHSA1O95433 338 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 ADAP00813 363 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 OPN1LWP04000 364 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 ANXA8P13928 327 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 ZNF708P17019 499 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 MAKP20794 623 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 PEX2P28328 305 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 RPS5P46782 204 aaKnown RBP11.27□□□□□ -0.61
PDPN-210ENST00000513143 GSSP48637 474 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 CLDN20P56880 219 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 PPP2R2BQ00005 443 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 LTBQ06643 244 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 MYBPHQ13203 477 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 ZNF74Q16587 644 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 CTU2Q2VPK5 515 aaKnown RBP11.27□□□□□ -0.61
PDPN-210ENST00000513143 KRTCAP3Q53RY4 240 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 OTUD3Q5T2D3 398 aaPredicted RBP11.27□□□□□ -0.61
PDPN-210ENST00000513143 FAM69AQ5T7M9 428 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 ZBTB49Q6ZSB9 765 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 ESPNLQ6ZVH7 1005 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 SLC46A3Q7Z3Q1 461 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 CBR4Q8N4T8 237 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 AQP11Q8NBQ7 271 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 MFSD8Q8NHS3 518 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 GNPDA2Q8TDQ7 276 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 NRG4Q8WWG1 115 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 LIPHQ8WWY8 451 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 SMPDL3BQ92485 455 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 SGTBQ96EQ0 304 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 FAM46AQ96IP4 442 aaKnown RBP11.27□□□□□ -0.61
PDPN-210ENST00000513143 OR5B2Q96R09 309 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 TIMP4Q99727 224 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 GPA33Q99795 319 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 RASSF4Q9H2L5 321 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 PLA2G2EQ9NZK7 142 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 SPRR3Q9UBC9 169 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 TRAPPC4Q9Y296 219 aa11.27□□□□□ -0.61
PDPN-210ENST00000513143 EPG5Q9HCE0 2579 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 A0A1W2PNR3 127 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 LIPT2A6NK58 231 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 FTCDNL1E5RQL4 147 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 LRRN3E7EW58 273 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 SOCS2O14508 198 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 ATXN7O15265 892 aaPredicted RBP11.26□□□□□ -0.61
PDPN-210ENST00000513143 OR7A10O76100 309 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 PMS2P2O95744 297 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 CH25HO95992 272 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 MT-ATP6P00846 226 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 BGLAPP02818 100 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 IMPDH2P12268 514 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 CPN1P15169 458 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 FPR3P25089 353 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 IDUAP35475 653 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 GPR4P46093 362 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 DAPP51397 102 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 TDGF1P3P51864 188 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 SUCLG1P53597 346 aaKnown RBP11.26□□□□□ -0.61
PDPN-210ENST00000513143 CLDN15P56746 228 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 CLDN18P56856 261 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 C19orf57Q0VDD7 668 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 TSPAN31Q12999 210 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 LRRC36Q1X8D7 754 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 ANKRD34AQ69YU3 496 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 KDM4DQ6B0I6 523 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 PPP4R4Q6NUP7 873 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 ARHGAP11AQ6P4F7 1023 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 CD300LDQ6UXZ3 194 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 TMPPEQ6ZT21 453 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 MEX3DQ86XN8 651 aaKnown RBP11.26□□□□□ -0.61
PDPN-210ENST00000513143 GHDCQ8N2G8 530 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 LSM14AQ8ND56 463 aaKnown RBP11.26□□□□□ -0.61
PDPN-210ENST00000513143 DNAJC9Q8WXX5 260 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms