RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 RBM4Q9BWF3 364 aaKnown RBP16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 TRAPPC4Q9Y296 219 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 FIS1Q9Y3D6 152 aa16.42■□□□□ 0.22
HMGCS1-206ENST00000511774 ARHGAP32A7KAX9 2087 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 LOC105371242A0A075B767 164 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 TMEM72A0PK05 275 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 CLDN24A6NM45 220 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 ADRA2AP08913 450 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 DDX5P17844 614 aaKnown RBP16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 KHKP50053 298 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 IL1RL1Q01638 556 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 SPDYE7PQ495Y7 208 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 GALNTL6Q49A17 601 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 ELFN2Q5R3F8 820 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 EIF3MQ7L2H7 374 aaKnown RBP16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 ZNF572Q7Z3I7 529 aaPredicted RBP16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 GRINAQ7Z429 371 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 LCA5Q86VQ0 697 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 ZNF563Q8TA94 476 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 SFXN5Q8TD22 340 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 MZB1Q8WU39 189 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 LRRC37BQ96QE4 947 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 ZNF350Q9GZX5 532 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 ZNF442Q9H7R0 627 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 OBP2BQ9NPH6 170 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 USP22Q9UPT9 525 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 PCDHB14Q9Y5E9 798 aa16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 SPIN1Q9Y657 262 aaPredicted RBP16.41■□□□□ 0.22
HMGCS1-206ENST00000511774 A0A096LPE4 126 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 EXOC1LA0A1B0GW35 172 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 A0A1W2PPZ6 126 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 ZNF503-AS2A6NEH8 195 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 AP3D1O14617 1153 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 PROCP04070 461 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 MSMBP08118 114 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 KRT16P08779 473 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 MYL2P10916 166 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 NPR2P20594 1047 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 COL8A2P25067 703 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 CLK1P49759 484 aaKnown RBP16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 AAED1Q7RTV5 226 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 R3HCC1LQ7Z5L2 792 aaKnown RBP16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 TMEM99Q8N816 258 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 ZDHHC22Q8N966 263 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 OR4F15Q8NGB8 312 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 OR9K2Q8NGE7 335 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 CKAP2Q8WWK9 683 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 ZNF747Q9BV97 191 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 TREM2Q9NZC2 230 aa16.4■□□□□ 0.22
HMGCS1-206ENST00000511774 A0A087WUV0 522 aaPredicted RBP16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 TMED7-TICAM2A0A0A6YYA0 188 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 ARPC4-TTLL3A0A0A6YYG9 625 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 ANKRD28O15084 1053 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 HPCAL1P37235 193 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 LMO4P61968 165 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 HBA1P69905 142 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 SLC35A1P78382 337 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 FUT5Q11128 374 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 PTGR1Q14914 329 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 ARHGAP11BQ3KRB8 267 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 AP1ARQ63HQ0 302 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 C8orf74Q6P047 294 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 SHQ1Q6PI26 577 aaKnown RBP16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 UGT2A3Q6UWM9 527 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 KRTCAP2Q8N6L1 136 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 POMGNT2Q8NAT1 580 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 ALKBH3Q96Q83 286 aaPredicted RBP16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 DYNLRB1Q9NP97 96 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 TMEM45AQ9NWC5 275 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 OSGIN1Q9UJX0 560 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 TMED7Q9Y3B3 224 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 DNAJC15Q9Y5T4 150 aa16.39■□□□□ 0.21
HMGCS1-206ENST00000511774 IGHV2OR16-5A0A0B4J2B6 119 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 TMEM233B4DJY2 109 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 H3BQF6 201 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 AZIN1O14977 448 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 STX11O75558 287 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 AKR7A3O95154 331 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 IGKV3-15P01624 115 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 HPXP02790 462 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 GAAP10253 952 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 IDH2P48735 452 aaKnown RBP16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 SELENOPP49908 381 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 DNAJB13P59910 316 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 OTUD3Q5T2D3 398 aaPredicted RBP16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 TYW3Q6IPR3 259 aaKnown RBP16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 PAQR6Q6TCH4 344 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 RNF165Q6ZSG1 346 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 CNOT9Q92600 299 aaKnown RBP16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 SLC6A7Q99884 636 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 NAA11Q9BSU3 229 aaPredicted RBP16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 G6PC2Q9NQR9 355 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 TMED5Q9Y3A6 229 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 GRIP1Q9Y3R0 1128 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 WNK1Q9H4A3 2382 aa16.38■□□□□ 0.21
HMGCS1-206ENST00000511774 A0A1W2PPM1 405 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 EIF1BO60739 113 aaKnown RBP16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 UPK3AO75631 287 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 NEFHP12036 1026 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 MATN1P21941 496 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms