RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 CDRT15Q96T59 188 aa4.71□□□□□ -1.66
GYPB-212ENST00000511198 NPY6RQ99463 290 aa4.71□□□□□ -1.66
GYPB-212ENST00000511198 MUC13Q9H3R2 512 aa4.71□□□□□ -1.66
GYPB-212ENST00000511198 PDFQ9HBH1 243 aa4.71□□□□□ -1.66
GYPB-212ENST00000511198 IMP3Q9NV31 184 aaKnown RBP4.71□□□□□ -1.66
GYPB-212ENST00000511198 ATAD3AQ9NVI7 634 aa4.71□□□□□ -1.66
GYPB-212ENST00000511198 ARMC1Q9NVT9 282 aa4.71□□□□□ -1.66
GYPB-212ENST00000511198 GID8Q9NWU2 228 aa4.71□□□□□ -1.66
GYPB-212ENST00000511198 SPRR3Q9UBC9 169 aa4.71□□□□□ -1.66
GYPB-212ENST00000511198 PCSK1NQ9UHG2 260 aa4.71□□□□□ -1.66
GYPB-212ENST00000511198 KLHL21Q9UJP4 597 aa4.71□□□□□ -1.66
GYPB-212ENST00000511198 IGLV3-12A0A075B6K2 115 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 FUOMA2VDF0 154 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 ERI2A8K979 691 aaKnown RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 NPIPB11E5RHQ5 1161 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 G3V2L1 256 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 BOLA2-SMG1P6H3BVE0 249 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 PSMD12O00232 456 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 KPNA4O00629 521 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 FBP2O00757 339 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 MAGEB3O15480 346 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 SRP72O76094 671 aaKnown RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 EPPINO95925 133 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 PLGP00747 810 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 ALOX5P09917 674 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 DANCRP0C864 163 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 GABRA1P14867 456 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 SDC4P31431 198 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 TIMP3P35625 211 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 RPL3P39023 403 aaKnown RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 CCR8P51685 355 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 STC1P52823 247 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 TMBIM6P55061 237 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 PSME3P61289 254 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 BNIP2Q12982 314 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 PDK1Q15118 436 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 RGS21Q2M5E4 152 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 SAMD4BQ5PRF9 694 aaKnown RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 HENMT1Q5T8I9 393 aaKnown RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 CASC4Q6P4E1 433 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 ZNF704Q6ZNC4 412 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 CLVS1Q8IUQ0 354 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 PSTKQ8IV42 348 aaKnown RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 DENND6AQ8IWF6 608 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 AQP12AQ8IXF9 295 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 MUC20Q8N307 709 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 EMC1Q8N766 993 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 ZNF441Q8N8Z8 693 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 C17orf50Q8WW18 174 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 NT5C3BQ969T7 300 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 ZUFSPQ96AP4 578 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 EFHD2Q96C19 240 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 ROPN1LQ96C74 230 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 PLEKHA8Q96JA3 519 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 MAELQ96JY0 434 aaKnown RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 OR52B2Q96RD2 323 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 BCL7BQ9BQE9 202 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 C9orf16Q9BUW7 83 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 C1orf50Q9BV19 199 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 SNRNP25Q9BV90 132 aaKnown RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 SHCBP1LQ9BZQ2 653 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 CHRNA10Q9GZZ6 450 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 SLITRK2Q9H156 845 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 RPF2Q9H7B2 306 aaKnown RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 METTL17Q9H7H0 456 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 KIR3DX1Q9H7L2 352 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 COQ10BQ9H8M1 238 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 LRRC40Q9H9A6 602 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 NMRAL1Q9HBL8 299 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 TMEM165Q9HC07 324 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 ESM1Q9NQ30 184 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 PFDN4Q9NQP4 134 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 DEPPQ9NTK1 212 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 CUTCQ9NTM9 273 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 ZNF226Q9NYT6 803 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 UBA2Q9UBT2 640 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 ZNF282Q9UDV7 671 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 PCDHGB4Q9UN71 923 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 KLF13Q9Y2Y9 288 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 PPIL1Q9Y3C6 166 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 ZNF711Q9Y462 761 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 PCDHGB5Q9Y5G0 923 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 HEY1Q9Y5J3 304 aa4.7□□□□□ -1.66
GYPB-212ENST00000511198 MAGED1Q9Y5V3 778 aaPredicted RBP4.7□□□□□ -1.66
GYPB-212ENST00000511198 MAGEB16A2A368 324 aa4.69□□□□□ -1.66
GYPB-212ENST00000511198 HTR3EA5X5Y0 456 aa4.69□□□□□ -1.66
GYPB-212ENST00000511198 PABPN1LA6NDY0 278 aaKnown RBP4.69□□□□□ -1.66
GYPB-212ENST00000511198 H3BMQ9 156 aa4.69□□□□□ -1.66
GYPB-212ENST00000511198 C3orf84H3BNL1 204 aa4.69□□□□□ -1.66
GYPB-212ENST00000511198 SCAMP2O15127 329 aaKnown RBP4.69□□□□□ -1.66
GYPB-212ENST00000511198 SMAD9O15198 467 aaKnown RBP4.69□□□□□ -1.66
GYPB-212ENST00000511198 CFLARO15519 480 aa4.69□□□□□ -1.66
GYPB-212ENST00000511198 MTX2O75431 263 aa4.69□□□□□ -1.66
GYPB-212ENST00000511198 SULT1C4O75897 302 aa4.69□□□□□ -1.66
GYPB-212ENST00000511198 CH25HO95992 272 aa4.69□□□□□ -1.66
GYPB-212ENST00000511198 GPIP06744 558 aa4.69□□□□□ -1.66
GYPB-212ENST00000511198 USF1P22415 310 aaPredicted RBP4.69□□□□□ -1.66
GYPB-212ENST00000511198 S100A1P23297 94 aa4.69□□□□□ -1.66
GYPB-212ENST00000511198 GCH1P30793 250 aa4.69□□□□□ -1.66
GYPB-212ENST00000511198 OPRM1P35372 400 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms