RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 DUX4Q9UBX2 424 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PPIAL4CA0A0B4J2A2 164 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 A0A1B0GVM2 712 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 P2RY10O00398 339 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 NRG2O14511 850 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SNAPC5O75971 98 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 RAB36O95755 333 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PPIAL4GP0DN37 164 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ITGA2P17301 1181 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CD22P20273 847 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 GPR12P47775 334 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 IL13RA1P78552 427 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 OPCMLQ14982 345 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ZBTB6Q15916 424 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 NKPD1Q17RQ9 610 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TIGD3Q6B0B8 471 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 POTEHQ6S545 545 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 C4orf22Q6V702 233 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 RCOR2Q8IZ40 523 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ADGRF3Q8IZF5 1079 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM86AQ8N2M4 240 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CLIP4Q8N3C7 705 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 RFESDQ8TAC1 157 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 FAM110DQ8TAY7 271 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 VAT1Q99536 393 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ADAM2Q99965 735 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 C1QTNF3Q9BXJ4 246 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 NPFFR1Q9GZQ6 430 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF665Q9H7R5 613 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 LOC105371242A0A075B767 164 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 LOC102723996A0A087X1L8 192 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 NEDD8-MDP1E9PL57 170 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 J3QR89 54 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 MATN3O15232 486 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 BUB3O43684 328 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 LDB3O75112 727 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 GLUD1P00367 558 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 EDN1P05305 212 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CCNB1P14635 433 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 GRNP28799 593 aaKnown RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 ETV4P43268 484 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 TEX44Q53QW1 395 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 C2CD6Q53TS8 623 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 COQ5Q5HYK3 327 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 C6orf141Q5SZD1 244 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 NAPEPLDQ6IQ20 393 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CNIH2Q6PI25 160 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 SMARCD3Q6STE5 483 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CTAGE3PQ8IX95 158 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 PNLDC1Q8NA58 520 aaKnown RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 RELL2Q8NC24 303 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 PTPMT1Q8WUK0 201 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 TBX15Q96SF7 602 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 MCOLN1Q9GZU1 580 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 DPAGT1Q9H3H5 408 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 WDR41Q9HAD4 459 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 GSN-AS1Q9NRJ2 163 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 OSER1Q9NX31 292 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 LMCD1Q9NZU5 365 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 P2RX2Q9UBL9 471 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 FNDC1Q4ZHG4 1894 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 UMODL1Q5DID0 1318 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 OTOL1A6NHN0 477 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 EVPLLA8MZ36 301 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 AQP9O43315 295 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 PROSCO94903 275 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 APOC1P02654 83 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 KLK3P07288 261 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF286BP0CG31 522 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 NTSP30990 170 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 RPA3P35244 121 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 RFC2P35250 354 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 PTGER3P43115 390 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 IER3P46695 156 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 UBE2MP61081 183 aaKnown RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 TRAM1Q15629 374 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 RGS21Q2M5E4 152 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 LARP4Q71RC2 724 aaKnown RBP eCLIP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 SLC47A2Q86VL8 602 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 METTL13Q8N6R0 699 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 GALNT11Q8NCW6 608 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 FBXO25Q8TCJ0 367 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 PIK3R3Q92569 461 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF837Q96EG3 531 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 TGM7Q96PF1 710 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 AMBRA1Q9C0C7 1298 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 ARL6Q9H0F7 186 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 PAK1IP1Q9NWT1 392 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 NXF1Q9UBU9 619 aaKnown RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 EXO1Q9UQ84 846 aaKnown RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 RBM7Q9Y580 266 aaKnown RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 GRIN2DO15399 1336 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 A0A0U1RQV5 110 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 TCRBV5S1A1TA0A578 114 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 SHISA7A6NL88 538 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CCT8L1PA6NM43 557 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CCRL2O00421 344 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 OR1F1O43749 312 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CDK1P06493 297 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 H2AFB2P0C5Z0 115 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms