RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, human

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1-205	ENST00000508756	SYT10	Q6XYQ8	523 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	RNF165	Q6ZSG1	346 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	MTURN	Q8N3F0	131 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	BHLHE23	Q8NDY6	225 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	OR5L2	Q8NGL0	311 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	BRSK1	Q8TDC3	778 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	NT5C3B	Q969T7	300 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	MYLPF	Q96A32	169 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	PGLYRP4	Q96LB8	373 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	RNF14	Q9UBS8	474 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	OR10H1	Q9Y4A9	318 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	COL4A4	P53420	1690 aa	Predicted RBP	4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	TTC41P	Q6P2S7	1318 aa		4.37	□□□□□ -1.71
CHD1-205	ENST00000508756	GOLGA8O	A6NCC3	632 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	HELT	A6NFD8	242 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	VSTM2B	A6NLU5	285 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756		E9PBE3	544 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	PPIAL4D	F5H284	164 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	GOLGA8N	F8WBI6	632 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	FOXE1	O00358	373 aa	Predicted RBP	4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	ECI2	O75521	394 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	CIB2	O75838	187 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	ASGR1	P07306	291 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	NCK1	P16333	377 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	TBXA2R	P21731	343 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	HTR2A	P28223	471 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	LRRC63	Q05C16	580 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	ZSCAN25	Q6NSZ9	544 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	KRTAP5-2	Q701N4	177 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	TMEM123	Q8N131	208 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	BBS5	Q8N3I7	341 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	FAM151A	Q8WW52	585 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	SLC41A3	Q96GZ6	507 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	GAL3ST1	Q99999	423 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	ZNF385D	Q9H6B1	395 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	CRLF2	Q9HC73	371 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	GLRX2	Q9NS18	164 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	ZNF225	Q9UK10	706 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	GSTK1	Q9Y2Q3	226 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	ALG6	Q9Y672	507 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	WSB1	Q9Y6I7	421 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	SLCO1B1	Q9Y6L6	691 aa		4.36	□□□□□ -1.71
CHD1-205	ENST00000508756	IGHV2-70D	A0A0C4DH43	119 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	ZNF716	A6NP11	495 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	ZSCAN12	O43309	604 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	KLF8	O95600	359 aa	Predicted RBP	4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	ZNF735	P0CB33	412 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	RCC1	P18754	421 aa	Predicted RBP	4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	NCF2	P19878	526 aa	Predicted RBP	4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	PSMA2	P25787	234 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	PPOX	P50336	477 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	PLK1	P53350	603 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	PRRX1	P54821	245 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	ARFRP1	Q13795	201 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	PDK3	Q15120	406 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	FAM228A	Q86W67	206 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	VSTM4	Q8IW00	320 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	SLC38A6	Q8IZM9	456 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	TTC5	Q8N0Z6	440 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	FAM71E2	Q8N5Q1	922 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	KIR3DL3	Q8N743	410 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	OR6C4	Q8NGE1	309 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	LCE3D	Q9BYE3	92 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	NAT10	Q9H0A0	1025 aa	Known RBP	4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	ETNK2	Q9NVF9	386 aa		4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	CAB39	Q9Y376	341 aa	Predicted RBP	4.35	□□□□□ -1.71
CHD1-205	ENST00000508756	ARHGAP21	Q5T5U3	1957 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	IGLV3-16	A0A075B6K0	115 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	TRBV6-6	A0A0A6YYG2	114 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	PRKY	O43930	277 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	UGT2B17	O75795	530 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	PGC	P20142	388 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	COX7A1	P24310	79 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	PRKX	P51817	358 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	BID	P55957	195 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	PRPS1	P60891	318 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	BST1	Q10588	318 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	RCN1	Q15293	331 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	TFDP3	Q5H9I0	405 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	SVOPL	Q8N434	492 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	ANKFN1	Q8N957	763 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	OR5D13	Q8NGL4	314 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	OR56B4	Q8NH76	319 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	RAET1E	Q8TD07	263 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	RLN3	Q8WXF3	142 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	C12orf66	Q96MD2	445 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	TMEM43	Q9BTV4	400 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	AIG1	Q9NVV5	245 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	TREM2	Q9NZC2	230 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	RAB26	Q9ULW5	256 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	DDX49	Q9Y6V7	483 aa	Known RBP	4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	FRMPD4	Q14CM0	1322 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	KIF16B	Q96L93	1317 aa		4.34	□□□□□ -1.71
CHD1-205	ENST00000508756	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.33	□□□□□ -1.72
CHD1-205	ENST00000508756		A6NDX4	124 aa		4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms