RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TREML4Q6UXN2 200 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 ZYG11AQ6WRX3 759 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 EIF3MQ7L2H7 374 aaKnown RBP8.14□□□□□ -1.11
NEDD9-211ENST00000508546 GRINAQ7Z429 371 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 ABHD12BQ7Z5M8 362 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-211ENST00000508546 CROCCP2Q86T23 111 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 PEG10Q86TG7 708 aaKnown RBP8.14□□□□□ -1.11
NEDD9-211ENST00000508546 ADGRG3Q86Y34 549 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 NATD1Q8N6N6 113 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 FAM169BQ8N8A8 192 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 FAM71CQ8NEG0 241 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 NUP37Q8NFH4 326 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 OR2T11Q8NH01 316 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 CLHC1Q8NHS4 586 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 ACMSDQ8TDX5 336 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 UBASH3BQ8TF42 649 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 WDR60Q8WVS4 1066 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 OIT3Q8WWZ8 545 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 OR5P2Q8WZ92 322 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 MOAP1Q96BY2 351 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 ZNF317Q96PQ6 595 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-211ENST00000508546 DOK1Q99704 481 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 PIF1Q9H611 641 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 ZNF442Q9H7R0 627 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 MOV10Q9HCE1 1003 aaKnown RBP8.14□□□□□ -1.11
NEDD9-211ENST00000508546 CTPS2Q9NRF8 586 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 PCDHB10Q9UN67 800 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 PTGDR2Q9Y5Y4 395 aa8.14□□□□□ -1.11
NEDD9-211ENST00000508546 ARPC4-TTLL3A0A0A6YYG9 625 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 CENPVL1A0A0U1RR11 272 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 EXOC1LA0A1B0GW35 172 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 TMEM129A0AVI4 362 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 SMIM23A6NLE4 172 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 DUXAA6NLW8 204 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 VSTM5A8MXK1 200 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 G3V2L1 256 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 hCG_2039718K7EN88 272 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 KLF11O14901 512 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 LSM1O15116 133 aaKnown RBP8.13□□□□□ -1.11
NEDD9-211ENST00000508546 RRP9O43818 475 aaKnown RBP8.13□□□□□ -1.11
NEDD9-211ENST00000508546 UGT2B17O75795 530 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 IGLV1-44P01699 117 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 IGFBP1P08833 259 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-211ENST00000508546 CECR9P0C854 216 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 MYL2P10916 166 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 LAMP1P11279 417 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 BCKDHAP12694 445 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 IFNGR1P15260 489 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 GCAP28676 217 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 PGM1P36871 562 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 HPCAL1P37235 193 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 OR2B6P58173 313 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 DNAJB13P59910 316 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 RPL38P63173 70 aaKnown RBP8.13□□□□□ -1.11
NEDD9-211ENST00000508546 SLC35A1P78382 337 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 POU3F1Q03052 451 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-211ENST00000508546 CCNIQ14094 377 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 GPR68Q15743 365 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 ARHGAP11BQ3KRB8 267 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 LSM12Q3MHD2 195 aaKnown RBP8.13□□□□□ -1.11
NEDD9-211ENST00000508546 TBRG1Q3YBR2 411 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 TTMPQ5BVD1 217 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 CFAP157Q5JU67 520 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 CLEC6AQ6EIG7 209 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 ANKRD16Q6P6B7 361 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 PAQR6Q6TCH4 344 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 HOMEZQ8IX15 550 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 OR7A2PQ8NGA2 310 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 ZNF563Q8TA94 476 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 MAGEE2Q8TD90 523 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-211ENST00000508546 EPS8L3Q8TE67 593 aaKnown RBP8.13□□□□□ -1.11
NEDD9-211ENST00000508546 PMM1Q92871 262 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 TMEM186Q96B77 213 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 ATP6V1G3Q96LB4 118 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 JMJD8Q96S16 334 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 NAA11Q9BSU3 229 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-211ENST00000508546 TMEM109Q9BVC6 243 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 SF3B5Q9BWJ5 86 aaKnown RBP8.13□□□□□ -1.11
NEDD9-211ENST00000508546 OR11A1Q9GZK7 315 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 ZNF350Q9GZX5 532 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 CENPHQ9H3R5 247 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 TMBIM4Q9HC24 238 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 TMEM45AQ9NWC5 275 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 HIF1ANQ9NWT6 349 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 DCDC2Q9UHG0 476 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 EMCNQ9ULC0 261 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 PCDHGB4Q9UN71 923 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 SLC35A3Q9Y2D2 325 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 GRIP1Q9Y3R0 1128 aa8.13□□□□□ -1.11
NEDD9-211ENST00000508546 HMGB1P1B2RPK0 211 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-211ENST00000508546 POLR3GO15318 223 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-211ENST00000508546 ZNF208O43345 1280 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 FCMRO60667 390 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 IGKV3-15P01624 115 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 TFP02787 698 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 MSMBP08118 114 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 GUSBP08236 651 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 IMPDH2P12268 514 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 HOXB1P14653 301 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-211ENST00000508546 CDH2P19022 906 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms