RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TGDSO95455 350 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 GSNP06396 782 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 BMP4P12644 408 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 MRPL19P49406 292 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 POLR2JP52435 117 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 CLEC12BQ2HXU8 276 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 SEZ6L2Q6UXD5 910 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 CASP12Q6UXS9 341 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 POMGNT2Q8NAT1 580 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 LILRB1Q8NHL6 650 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 ZNF775Q96BV0 537 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 TLCD1Q96CP7 247 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 ADAD1Q96M93 576 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 HS6ST2Q96MM7 605 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 AMBRA1Q9C0C7 1298 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 OR11A1Q9GZK7 315 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 TMBIM4Q9HC24 238 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 OBP2BQ9NPH6 170 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 FLVCR1Q9Y5Y0 555 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 MAP1AP78559 2803 aaPredicted RBP12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 TMEM72A0PK05 275 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 AP3D1O14617 1153 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 ABCD4O14678 606 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 SMAD7O15105 426 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 RAD51DO75771 328 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 SOD3P08294 240 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 TFPTP0C1Z6 253 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 CCNA2P20248 432 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 PPIBP23284 216 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 MVDP53602 400 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 CDH11P55287 796 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 PLAURQ03405 335 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 FAPQ12884 760 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 VEZF1Q14119 521 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 SLC17A1Q14916 467 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 COX20Q5RI15 118 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 C6orf10Q5SRN2 563 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 OTUD3Q5T2D3 398 aaPredicted RBP12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 KLHL24Q6TFL4 600 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 C5orf46Q6UWT4 87 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 CIARTQ8N365 385 aaPredicted RBP12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 KBTBD8Q8NFY9 601 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 PNPT1Q8TCS8 783 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 STK35Q8TDR2 534 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 SLC38A5Q8WUX1 472 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 C7orf26Q96N11 449 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 ZNF317Q96PQ6 595 aaPredicted RBP12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 TRAF4Q9BUZ4 470 aaPredicted RBP12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 SPATA9Q9BWV2 254 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 FKRPQ9H9S5 495 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 BCL2L10Q9HD36 194 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 POU2F3Q9UKI9 436 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 SLC25A15Q9Y619 301 aa12.71□□□□□ -0.37
HMGCS1-203ENST00000507004 CSPG4Q6UVK1 2322 aa12.71□□□□□ -0.38
HMGCS1-203ENST00000507004 NF1P21359 2839 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 LIPT2A6NK58 231 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 SHISA9B4DS77 424 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 POLR3GO15318 223 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 ADAM11O75078 769 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 WNT11O96014 354 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 BCHEP06276 602 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 IMPDH2P12268 514 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 BMP2P12643 396 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 NCF2P19878 526 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 MPGP29372 298 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 DSCR9P59020 149 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 GABRA6Q16445 453 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 PGGHGQ32M88 737 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 SLC9B1Q4ZJI4 515 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 AGBL2Q5U5Z8 902 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 TMEM225Q6GV28 225 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 ZNF544Q6NX49 715 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 Q71RC1 249 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 CCDC103Q8IW40 242 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 FBXL14Q8N1E6 418 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 BBS10Q8TAM1 723 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 BOD1Q96IK1 185 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 DHRS9Q9BPW9 319 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 EVA1AQ9H8M9 152 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 C12orf10Q9HB07 376 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 ZNF443Q9Y2A4 671 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 USH1CQ9Y6N9 552 aa12.7□□□□□ -0.38
HMGCS1-203ENST00000507004 AQP7P3A6NL99 342 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 C5orf58C9J3I9 102 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 PDLIM1O00151 329 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 AHSA1O95433 338 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 IGHV3-9P01782 118 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 ETFAP13804 333 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 ETS2P15036 469 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 EDNRAP25101 427 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 CD40P25942 277 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 ACAA2P42765 397 aaKnown RBP12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 PRPS1P60891 318 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 TNK1Q13470 666 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 BEND6Q5SZJ8 279 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 SLC22A25Q6T423 547 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 EPGNQ6UW88 154 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 ZNF836Q6ZNA1 936 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 AAED1Q7RTV5 226 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 HMGN2P46Q86SG4 172 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms