RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 HIP1O00291 1037 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 XCR1P46094 333 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 GNPDA1P46926 289 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 KRTAP10-6P60371 365 aaPredicted RBP4.47□□□□□ -1.69
HERC4-213ENST00000506515 NTHL1P78549 312 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 RGS1Q08116 209 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 TGIF1Q15583 401 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 QRICH1Q2TAL8 776 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 VITQ6UXI7 678 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 STAC2Q6ZMT1 411 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 DPY19L4Q7Z388 723 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 CD177Q8N6Q3 437 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 CCDC26Q8TAB7 109 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 DTNBP1Q96EV8 351 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 SDSLQ96GA7 329 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 SLC7A10Q9NS82 523 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 NRBP2Q9NSY0 501 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.47□□□□□ -1.69
HERC4-213ENST00000506515 DDX49Q9Y6V7 483 aaKnown RBP4.47□□□□□ -1.69
HERC4-213ENST00000506515 COL1A2P08123 1366 aa4.47□□□□□ -1.69
HERC4-213ENST00000506515 MAP1BP46821 2468 aaKnown RBP4.46□□□□□ -1.7
HERC4-213ENST00000506515 SAGE2PA6NJ88 616 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 HIDE1A8MVS5 230 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 NDC80O14777 642 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 PHOX2AO14813 284 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 NMT2O60551 498 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 DUSP14O95147 198 aaKnown RBP4.46□□□□□ -1.7
HERC4-213ENST00000506515 BCKDHAP12694 445 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 GDF1P27539 372 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 RPL8P62917 257 aaKnown RBP4.46□□□□□ -1.7
HERC4-213ENST00000506515 CSTF1Q05048 431 aaKnown RBP4.46□□□□□ -1.7
HERC4-213ENST00000506515 ELP6Q0PNE2 266 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 ASAH1Q13510 395 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 IMMTQ16891 758 aaKnown RBP4.46□□□□□ -1.7
HERC4-213ENST00000506515 GSG1Q2KHT4 349 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 TEX44Q53QW1 395 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 NCR3LG1Q68D85 454 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 SPINK14Q6IE38 97 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 OR8G2PQ6IF36 304 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 CGB2Q6NT52 195 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 C2orf66Q6UXQ4 117 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 IFNEQ86WN2 208 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 CSNK1A1LQ8N752 337 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 OR2T33Q8NG76 320 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 M1APQ8TC57 530 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 MSANTD3Q96H12 275 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 TSGA13Q96PP4 275 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 TMEM175Q9BSA9 504 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 FEM1AQ9BSK4 669 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 TSSK1BQ9BXA7 367 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 CWH43Q9H720 699 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 FARSBQ9NSD9 589 aaKnown RBP4.46□□□□□ -1.7
HERC4-213ENST00000506515 EHFQ9NZC4 300 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 CRLS1Q9UJA2 301 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 BLOC1S6Q9UL45 172 aa4.46□□□□□ -1.7
HERC4-213ENST00000506515 IGHV3-35A0A0C4DH35 117 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 A0A1B0GWJ7 208 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 CYSRT1A8MQ03 144 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 STX7O15400 261 aaKnown RBP4.45□□□□□ -1.7
HERC4-213ENST00000506515 TRIM3O75382 744 aaPredicted RBP4.45□□□□□ -1.7
HERC4-213ENST00000506515 MFN2O95140 757 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 DCNP07585 359 aaKnown RBP4.45□□□□□ -1.7
HERC4-213ENST00000506515 GOLGA8HP0CJ92 632 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 FASP25445 335 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 ATP5A1P25705 553 aaKnown RBP4.45□□□□□ -1.7
HERC4-213ENST00000506515 HTR2AP28223 471 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 MDH2P40926 338 aaKnown RBP4.45□□□□□ -1.7
HERC4-213ENST00000506515 CXCL12P48061 93 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 HSD17B7P56937 341 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 BDH1Q02338 343 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 ZNF154Q13106 437 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 PAN3Q58A45 887 aaKnown RBP4.45□□□□□ -1.7
HERC4-213ENST00000506515 DCST2Q5T1A1 773 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 BLOC1S2Q6QNY1 142 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 ANKRD37Q7Z713 158 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 GPD1LQ8N335 351 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 SPEM1Q8N4L4 309 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 NANPQ8TBE9 248 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 THRSPQ92748 146 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 CLDN23Q96B33 292 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 CASD1Q96PB1 797 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 GCOM2Q9BZD3 368 aaPredicted RBP4.45□□□□□ -1.7
HERC4-213ENST00000506515 RIBC2Q9H4K1 309 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 PSTPIP2Q9H939 334 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 MRPL39Q9NYK5 338 aaKnown RBP4.45□□□□□ -1.7
HERC4-213ENST00000506515 DPM3Q9P2X0 92 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 CHRNA9Q9UGM1 479 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 ANAPC7Q9UJX3 599 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 GINS2Q9Y248 185 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 ASPMQ8IZT6 3477 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 SF3B1O75533 1304 aaKnown RBP eCLIP4.45□□□□□ -1.7
HERC4-213ENST00000506515 NFASCO94856 1347 aa4.45□□□□□ -1.7
HERC4-213ENST00000506515 GSTTP1A0A1W2PQM5 241 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 CLDN5O00501 218 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 EFNA2O43921 213 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 CALM1P0DP23 149 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 CALM2P0DP24 149 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 CALM3P0DP25 149 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 IGHV1-2P23083 117 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 PSMA2P25787 234 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms