RNA–Protein interactions for RNA: ENST00000506464.5

ABCC3-208, Transcript of ATP binding cassette subfamily C member 3, human

TSL 4

Gene ABCC3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCC3-208	ENST00000506464	IDH2	P48735	452 aa	Known RBP	10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	MTPN	P58546	118 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	GNGT1	P63211	74 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	SLC35A1	P78382	337 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	SELPLG	Q14242	412 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	MAPRE2	Q15555	327 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	TRMT5	Q32P41	509 aa	Known RBP	10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	COQ5	Q5HYK3	327 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	TIMM23B	Q5SRD1	257 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	NCMAP	Q5T1S8	102 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	PRAMEF8	Q5VWM4	474 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	PRAMEF7	Q5VXH5	474 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	REP15	Q6BDI9	236 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	BHLHA15	Q7RTS1	189 aa	Predicted RBP	10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	SNX32	Q86XE0	403 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	ADGRG3	Q86Y34	549 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	KRTAP1-3	Q8IUG1	177 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	IGFBPL1	Q8WX77	278 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	CNOT9	Q92600	299 aa	Known RBP	10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	MUCL1	Q96DR8	90 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	RADIL	Q96JH8	1075 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	ELAC2	Q9BQ52	826 aa	Known RBP	10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	FAM107B	Q9H098	131 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	PIF1	Q9H611	641 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	BCL2L10	Q9HD36	194 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	PARPBP	Q9NWS1	579 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	ZNF232	Q9UNY5	417 aa		10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	NOSIP	Q9Y314	301 aa	Known RBP	10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	SETD2	Q9BYW2	2564 aa	Predicted RBP	10.84	□□□□□ -0.67
ABCC3-208	ENST00000506464	TMED7-TICAM2	A0A0A6YYA0	188 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464		A0A0G2JPF8	293 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	GMNC	A6NCL1	334 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	BBIP1	A8MTZ0	92 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	EVPLL	A8MZ36	301 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	HNRNPCL2	B2RXH8	293 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	ZNF814	B7Z6K7	855 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	HNRNPCL3	B7ZW38	293 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	MRAS	O14807	208 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	SNX3	O60493	162 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	HNRNPCL1	O60812	293 aa	Known RBP	10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	PGM3	O95394	542 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	HNRNPCL4	P0DMR1	293 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	GGT1	P19440	569 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	PTH2R	P49190	550 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	COPZ1	P61923	177 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	EPS8	Q12929	822 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	CAPRIN1	Q14444	709 aa	Known RBP	10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	LARS2	Q15031	903 aa	Known RBP	10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	TAB1	Q15750	504 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	ETFDH	Q16134	617 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	ADRM1	Q16186	407 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	MRPL2	Q5T653	305 aa	Known RBP	10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	RNF220	Q5VTB9	566 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	FBXW9	Q5XUX1	488 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	ZNF836	Q6ZNA1	936 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	YTHDF3	Q7Z739	585 aa	Known RBP	10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	VRK2	Q86Y07	508 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	NFKBID	Q8NI38	313 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	BBS10	Q8TAM1	723 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	SLC35B4	Q969S0	331 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	FBXW5	Q969U6	566 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	APH1A	Q96BI3	265 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	ZNF300	Q96RE9	604 aa	Predicted RBP	10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	NSRP1	Q9H0G5	558 aa	Known RBP	10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	TMEM38A	Q9H6F2	299 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	ZNF701	Q9NV72	531 aa	Predicted RBP	10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	ZNF443	Q9Y2A4	671 aa	Predicted RBP	10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	SLC9A8	Q9Y2E8	581 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	IFT52	Q9Y366	437 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	TMED7	Q9Y3B3	224 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	CHST2	Q9Y4C5	530 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	NF1	P21359	2839 aa		10.83	□□□□□ -0.68
ABCC3-208	ENST00000506464	VPS13C	Q709C8	3753 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	CDHR4	A6H8M9	788 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	ZNF716	A6NP11	495 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	AP3D1	O14617	1153 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	MRPL33	O75394	65 aa	Known RBP	10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	TACR3	P29371	465 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	OR2B6	P58173	313 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	RPS4X	P62701	263 aa	Known RBP	10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	H3F3A	P84243	136 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	CDK6	Q00534	326 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	PPA1	Q15181	289 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	WBP2NL	Q6ICG8	309 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	OR7E24	Q6IFN5	339 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	PAQR6	Q6TCH4	344 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	NET1	Q7Z628	596 aa	Predicted RBP	10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	PTOV1	Q86YD1	416 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	OR52P1P	Q8NH57	321 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	AKAP1	Q92667	903 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	GTPBP3	Q969Y2	492 aa	Known RBP	10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	TRMT61A	Q96FX7	289 aa	Known RBP	10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	PERP	Q96FX8	193 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	ARL5B	Q96KC2	179 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	COX4I2	Q96KJ9	171 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	SF3B5	Q9BWJ5	86 aa	Known RBP	10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	RSPO3	Q9BXY4	272 aa	Predicted RBP	10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	GRIP2	Q9C0E4	1043 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	ADAM19	Q9H013	955 aa		10.82	□□□□□ -0.68
ABCC3-208	ENST00000506464	KAT8	Q9H7Z6	458 aa	Known RBP	10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms