RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 LINC01555Q8NAE3 123 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 MFSD9Q8NBP5 474 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 SLC35E1Q96K37 410 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 MTMR9Q96QG7 549 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 HIST1H4GQ99525 98 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 PARD6BQ9BYG5 372 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 RAB34Q9BZG1 259 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 C20orf85Q9H1P6 137 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 AIG1Q9NVV5 245 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 COPS3Q9UNS2 423 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 NEUROG3Q9Y4Z2 214 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 V9GY05 133 aa3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 ZNF646O15015 1829 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC13-206ENST00000504751 TRAV26-1A0A087WT03 109 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 A6NIZ1 184 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 CAPN1P07384 714 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 HSMCR30P0CW71 290 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 ZNF17P17021 662 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 ATP6V1B2P21281 511 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 RPL13AP40429 203 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 CCT3P49368 545 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 PKNOX1P55347 436 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 RAP1BP61224 184 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 TNFRSF17Q02223 184 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 VGLL4Q14135 290 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 DPYSL2Q16555 572 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 C1orf100Q5SVJ3 147 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 PDZK1Q5T2W1 519 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 OR52E8Q6IFG1 317 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 ZSCAN25Q6NSZ9 544 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 RFLNAQ6ZTI6 216 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 PGAP1Q75T13 922 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 OR10G3Q8NGC4 313 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 OR4K14Q8NGD5 310 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 OR51S1Q8NGJ8 323 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 OR5D13Q8NGL4 314 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 PAGE5Q96GU1 130 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 SLC41A3Q96GZ6 507 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 SEC22AQ96IW7 307 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 SLC38A2Q96QD8 506 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 PSKH2Q96QS6 385 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 SECISBP2Q96T21 854 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 RNF2Q99496 336 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 NPAS2Q99743 824 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 TSG101Q99816 390 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 TMEM43Q9BTV4 400 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 CAPS2Q9BXY5 557 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 POLR2J2Q9GZM3 115 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 POLR2J3Q9H1A7 115 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 RBKSQ9H477 322 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 FOLH1BQ9HBA9 442 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 RABL2BQ9UNT1 228 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 ASF1AQ9Y294 204 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 RPL36Q9Y3U8 105 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 MEGF6O75095 1541 aa3.68□□□□□ -1.82
TRAPPC13-206ENST00000504751 THSD7BQ9C0I4 1608 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 E9PBE3 544 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 KRTAP4-16G5E9R7 235 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 MBTPS2O43462 519 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 COX7A1P24310 79 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 CCNE1P24864 410 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 CXCR2P25025 360 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 HMGB2P26583 209 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 RFC4P35249 363 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 CTRLP40313 264 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 DUSP3P51452 185 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 CRYBB1P53674 252 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 SELENOTP62341 195 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 ASPHQ12797 758 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 NSDHLQ15738 373 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 SLC34A3Q8N130 599 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 DCAF4L2Q8NA75 395 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 MAIP1Q8WWC4 291 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 FGF11Q92914 225 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 HES7Q9BYE0 225 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 REEP4Q9H6H4 257 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 YY1AP1Q9H869 796 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 MMP26Q9NRE1 261 aa3.67□□□□□ -1.82
TRAPPC13-206ENST00000504751 CHD4Q14839 1912 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 PNPLA6Q8IY17 1366 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 A8MUA0 341 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 HIP1O00291 1037 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 NBR2O15453 112 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 POLR2DO15514 142 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 UGT1A9O60656 530 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 ATP5LO75964 103 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 OPN1MWP04001 364 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 OPN1MW2P0DN77 364 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 OPN1MW3P0DN78 364 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 DBTP11182 482 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 MGMTP16455 207 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 DDOSTP39656 456 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 KIR2DS4P43632 304 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 ACTR1AP61163 376 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 TGFBR3Q03167 851 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 FGL1Q08830 312 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 ARFRP1Q13795 201 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 PARP15Q460N3 678 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 RGS9BPQ6ZS82 235 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 RNF165Q6ZSG1 346 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms