RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 OR52P1PQ8NH57 321 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 NEUROG1Q92886 237 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 KISS1RQ969F8 398 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 SMR3AQ99954 134 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 CCDC28BQ9BUN5 200 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 POTEKPQ9BYX7 375 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 IKZF5Q9H5V7 419 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 ZNF385DQ9H6B1 395 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 BCL2L10Q9HD36 194 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 A4GALTQ9NPC4 353 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 FANCFQ9NPI8 374 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 TCF7L2Q9NQB0 619 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 ZNF701Q9NV72 531 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 TMEM181Q9P2C4 612 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 MALT1Q9UDY8 824 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 ZNF443Q9Y2A4 671 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 FLVCR1Q9Y5Y0 555 aa12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 SPIN1Q9Y657 262 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-211ENST00000504318 A0A096LPI6 279 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 OVOL3O00110 214 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 ITGA5P08648 1049 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 CRATP43155 626 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 MAP2K6P52564 334 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 CRISP3P54108 245 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 SLC17A1Q14916 467 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 LIN52Q52LA3 116 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 PRAMEF8Q5VWM4 474 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 PRAMEF7Q5VXH5 474 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 ZIC4Q8N9L1 334 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 STON2Q8WXE9 905 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 HSD17B8Q92506 261 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 MAL2Q969L2 176 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 C3orf49Q96BT1 292 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 AMBRA1Q9C0C7 1298 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 RMND5AQ9H871 391 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 VAPAQ9P0L0 249 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 PRDM4Q9UKN5 801 aa12.34□□□□□ -0.43
PDLIM7-211ENST00000504318 CSPG4Q6UVK1 2322 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 TLN2Q9Y4G6 2542 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 A0A0G2JPF8 293 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 LIPT2A6NK58 231 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 HNRNPCL2B2RXH8 293 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 HNRNPCL3B7ZW38 293 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 CLIC1O00299 241 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 HNRNPCL1O60812 293 aaKnown RBP12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 SMPD2O60906 423 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 DCTN3O75935 186 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 HNRNPCL4P0DMR1 293 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 TFPIP10646 304 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 CCNA2P20248 432 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 IL32P24001 234 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 PTH2RP49190 550 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 ATP4BP51164 291 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 EGR4Q05215 589 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 FADDQ13158 208 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 KRTAP21-3Q3LHN1 58 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 FBXW9Q5XUX1 488 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 PAQR6Q6TCH4 344 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 C6orf89Q6UWU4 347 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 CCDC121Q6ZUS5 278 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 SERPINA11Q86U17 422 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 ZNF440Q8IYI8 595 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 PIGXQ8TBF5 258 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 AKAP1Q92667 903 aaKnown RBP eCLIP12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 C18orf12Q96KH6 178 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 COX4I2Q96KJ9 171 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 SPATA9Q9BWV2 254 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 TRIM2Q9C040 744 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 CALML5Q9NZT1 146 aa12.33□□□□□ -0.44
PDLIM7-211ENST00000504318 SHISA9B4DS77 424 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 FTCDNL1E5RQL4 147 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 FRS3O43559 492 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 IGHV3-9P01782 118 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 SOD3P08294 240 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 ARAFP10398 606 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 ADSLP30566 484 aaPredicted RBP12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 AQP5P55064 265 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 BSPH1Q075Z2 132 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 BNIP2Q12982 314 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 ADRM1Q16186 407 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 PGGHGQ32M88 737 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 TIMM23BQ5SRD1 257 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 C6orf10Q5SRN2 563 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 WBP2NLQ6ICG8 309 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 CGB2Q6NT52 195 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 DLEU7Q6UYE1 221 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 KBTBD8Q8NFY9 601 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 SLC35B4Q969S0 331 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 TMEM45BQ96B21 275 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 DDIT4LQ96D03 193 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 SPDL1Q96EA4 605 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 PERPQ96FX8 193 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 USB1Q9BQ65 265 aaKnown RBP12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 PTDSS2Q9BVG9 487 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 TMEM45AQ9NWC5 275 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 THUMPD1Q9NXG2 353 aaKnown RBP12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 EMC3Q9P0I2 261 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 NOSIPQ9Y314 301 aaKnown RBP12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 RNF115Q9Y4L5 304 aa12.32□□□□□ -0.44
PDLIM7-211ENST00000504318 SLC25A15Q9Y619 301 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms