RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 IGHV1-2P23083 117 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 CCNCP24863 283 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 MRPS11P82912 194 aaKnown RBP4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 MRPL28Q13084 256 aaKnown RBP4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 PLD1Q13393 1074 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 SLC15A2Q16348 729 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 TRIM16LQ309B1 348 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 LIPNQ5VXI9 398 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 FAM83FQ8NEG4 500 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 TCTEX1D2Q8WW35 142 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 NR4A3Q92570 626 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 MRPS31Q92665 395 aaKnown RBP4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 TOMM40LQ969M1 308 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 UBE2E3Q969T4 207 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 PSMG2Q969U7 264 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 FAF2Q96CS3 445 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 SOSTQ9BQB4 213 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 RAB34Q9BZG1 259 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 YY1AP1Q9H869 796 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 CUTCQ9NTM9 273 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 SPATA7Q9P0W8 599 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 SPRR3Q9UBC9 169 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 ANGPTL2Q9UKU9 493 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 ERVW-1Q9UQF0 538 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 ARHGEF10O15013 1369 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 QRICH2Q9H0J4 1663 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 THSD7AQ9UPZ6 1657 aa4.13□□□□□ -1.75
HMGB1P3-201ENST00000502802 ATP7BP35670 1465 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 LOC100131303A0A0U1RQF7 123 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 GOLGA8SH3BPF8 625 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 SULT2B1O00204 365 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 CXCL13O43927 109 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 PRKYO43930 277 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 OR10H3O60404 316 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 KLHL41O60662 606 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 RAMP3O60896 148 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 GPX5O75715 221 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 ATP5LO75964 103 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 GCFC2P16383 781 aaKnown RBP4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 GNA11P29992 359 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 FGF9P31371 208 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 CCR1P32246 355 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 MAP3K8P41279 467 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 MAGEA9P43362 315 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 XCR1P46094 333 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 DAP3P51398 398 aaKnown RBP4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 PRKXP51817 358 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 IST1P53990 364 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 RPL32P62910 135 aaKnown RBP4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 OGDHQ02218 1023 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 RUNX3Q13761 415 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 RCN1Q15293 331 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 MRGPRG-AS1Q2M3A8 158 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 HSP90AB3PQ58FF7 597 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 C1orf220Q5T0J3 134 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 UTS2BQ765I0 119 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 TRIM69Q86WT6 500 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 TTC5Q8N0Z6 440 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 ALLCQ8N6M5 410 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 CATSPER1Q8NEC5 780 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 MAGEE2Q8TD90 523 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 TIMD4Q96H15 378 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 MS4A14Q96JA4 679 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 IL4I1Q96RQ9 567 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 ZFP14Q9HCL3 533 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 CLEC5AQ9NY25 188 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 B3GNT2Q9NY97 397 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 ZNF581Q9P0T4 197 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 DPM3Q9P2X0 92 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 WARS2Q9UGM6 360 aaKnown RBP4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 PHF11Q9UIL8 331 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 KLK13Q9UKR3 277 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 PDE10AQ9Y233 779 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 PPIAL4AQ9Y536 164 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 AKAP12Q02952 1782 aa4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 BLMP54132 1417 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P3-201ENST00000502802 TRPM1Q7Z4N2 1603 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 LMO7Q8WWI1 1683 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 RGS16O15492 202 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 LATO43561 262 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 PI15O43692 258 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 WBP4O75554 376 aaKnown RBP4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 GNA14O95837 355 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 RNH1P13489 461 aaKnown RBP4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 PGAM2P15259 253 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 ADORA2BP29275 332 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 NMT1P30419 496 aaKnown RBP4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 RPL29P47914 159 aaKnown RBP4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 STARP49675 285 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 HLCSP50747 726 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 HNRNPA3P51991 378 aaKnown RBP4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 PRMT2P55345 433 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 RIPK4P57078 832 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 GBE1Q04446 702 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 SRSF5Q13243 272 aaKnown RBP4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 SERTAD2Q14140 314 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 KLHL38Q2WGJ6 581 aa4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 GLYR1Q49A26 553 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P3-201ENST00000502802 SLC22A6Q4U2R8 563 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms