RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 CDK4P11802 303 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 LIFP15018 202 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 HOXB6P17509 224 aaKnown RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 CDH2P19022 906 aaPredicted RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 TBXA2RP21731 343 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 RPS4Y1P22090 263 aaKnown RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 MMP11P24347 488 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ITGA3P26006 1051 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ELK4P28324 431 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 FMO3P31513 532 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 EVI2BP34910 448 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ACAA2P42765 397 aaKnown RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 HSPA13P48723 471 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 PNLIPRP2P54317 469 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 CDH15P55291 814 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 PPP2R2BQ00005 443 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 CD83Q01151 205 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 OC90Q02509 493 aaPredicted RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ZNF117Q03924 483 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 PIGFQ07326 219 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ST3GAL3Q11203 375 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 FHL2Q14192 279 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 TOMM20Q15388 145 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 INPP5JQ15735 1006 aaPredicted RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 TOMM34Q15785 309 aaPredicted RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 EXT1Q16394 746 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 MEP1AQ16819 746 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 SLC36A3Q495N2 470 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 GXYLT1Q4G148 440 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 KLHL26Q53HC5 615 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ALG10BQ5I7T1 473 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 CLEC12AQ5QGZ9 265 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 RNF220Q5VTB9 566 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 IGFL4Q6B9Z1 124 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 PGBD2Q6P3X8 592 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 FAHD1Q6P587 224 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 TMEM154Q6P9G4 183 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 TTC33Q6PID6 262 aaPredicted RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 KLHL17Q6TDP4 642 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 WDR88Q6ZMY6 472 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ZNF550Q7Z398 422 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ZER1Q7Z7L7 766 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 MRGPREQ86SM8 312 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 RPS19BP1Q86WX3 136 aaKnown RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 RAB43Q86YS6 212 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 APLFQ8IW19 511 aaPredicted RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 NRMQ8IXM6 262 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ZNF441Q8N8Z8 693 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 POGLUT1Q8NBL1 392 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 OR13C2Q8NGS9 318 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 B4GALNT2Q8NHY0 566 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 CNIH3Q8TBE1 160 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 PIGXQ8TBF5 258 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 SLC7A13Q8TCU3 470 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 GNPDA2Q8TDQ7 276 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ELP5Q8TE02 316 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ASB15Q8WXK1 588 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 CFHR4Q92496 578 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 TFAP2CQ92754 450 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 KIAA1143Q96AT1 154 aaPredicted RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 OTULINQ96BN8 352 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ZNF524Q96C55 264 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 TMCO6Q96DC7 493 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 HSPBAP1Q96EW2 488 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 IMMP1LQ96LU5 166 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 RASL10BQ96S79 203 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 GPA33Q99795 319 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ZNF559Q9BR84 538 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 DPH1Q9BZG8 443 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 SPRY4Q9C004 299 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 SEMA4CQ9C0C4 833 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 GABARAPL1Q9H0R8 117 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 POLR2J3Q9H1A7 115 aaKnown RBP4.33□□□□□ -1.72
CMSS1-209ENST00000497345 ADNPQ9H2P0 1102 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 EGLN3Q9H6Z9 239 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 RASSF1Q9NS23 344 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 MAN2C1Q9NTJ4 1040 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 C20orf141Q9NUB4 165 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 USE1Q9NZ43 259 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 KLK13Q9UKR3 277 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 VDAC3Q9Y277 283 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 PCDHGA3Q9Y5H0 932 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 GMPPBQ9Y5P6 360 aa4.33□□□□□ -1.72
CMSS1-209ENST00000497345 USP34Q70CQ2 3546 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 RIF1Q5UIP0 2472 aaKnown RBP4.32□□□□□ -1.72
CMSS1-209ENST00000497345 TRAV27A0A087WT01 109 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 LOC102723996A0A087X1L8 192 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 A0A0G2JNJ9 132 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 LOC100130705A0A1B0GUX0 176 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 A0A1W2PRQ8 180 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 UNC119BA6NIH7 251 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 OR6C70A6NIJ9 312 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 EFCAB9A8MZ26 197 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 PROB1E7EW31 1015 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 PTGES3LE9PB15 166 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 NPIPB9F8W1W9 429 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 TO15178 435 aa4.32□□□□□ -1.72
CMSS1-209ENST00000497345 DENRO43583 198 aaKnown RBP4.32□□□□□ -1.72
CMSS1-209ENST00000497345 SERPINI2O75830 405 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms