RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 POLE4Q9NR33 117 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 HYPKQ9NX55 129 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 SEC14L3Q9UDX4 400 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 N6AMT1Q9Y5N5 214 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 TTC21BQ7Z4L5 1316 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 ATP10AO60312 1499 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 A0A0U1RQS6 177 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 OR52A4PA6NMU1 304 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 DCTN6O00399 190 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 SNX4O95219 450 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 RPS2P15880 293 aaKnown RBP2.89□□□□□ -1.95
SMC4-225ENST00000497203 NCF2P19878 526 aaPredicted RBP2.89□□□□□ -1.95
SMC4-225ENST00000497203 MX1P20591 662 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 QARSP47897 775 aaKnown RBP2.89□□□□□ -1.95
SMC4-225ENST00000497203 ATP1B3P54709 279 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 BIDP55957 195 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 ATP5IP56385 69 aaPredicted RBP2.89□□□□□ -1.95
SMC4-225ENST00000497203 LRRC74AQ0VAA2 488 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 ORC2Q13416 577 aaPredicted RBP2.89□□□□□ -1.95
SMC4-225ENST00000497203 VGLL4Q14135 290 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 NSUN5P1Q3KNT7 163 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 DMRTC1Q5HYR2 192 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 PHYHD1Q5SRE7 291 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 C1orf146Q5VVC0 180 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 SCARA5Q6ZMJ2 495 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 ZNF584Q8IVC4 421 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 C11orf42Q8N5U0 333 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 NECAB1Q8N987 351 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 OR8J1Q8NGP2 316 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 MAGEE2Q8TD90 523 aaPredicted RBP2.89□□□□□ -1.95
SMC4-225ENST00000497203 NT5C3BQ969T7 300 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 MARC2Q969Z3 335 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 PAGE5Q96GU1 130 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 C16orf74Q96GX8 76 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 TIMD4Q96H15 378 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 RNF2Q99496 336 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 GON7Q9BXV9 100 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 YTHDF1Q9BYJ9 559 aaKnown RBP2.89□□□□□ -1.95
SMC4-225ENST00000497203 PKIBQ9C010 78 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 SUDS3Q9H7L9 328 aaPredicted RBP2.89□□□□□ -1.95
SMC4-225ENST00000497203 PLGRKTQ9HBL7 147 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 TREM2Q9NZC2 230 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 NPTNQ9Y639 398 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 KIF25-AS1Q9Y6Z4 181 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 CHD4Q14839 1912 aa2.89□□□□□ -1.95
SMC4-225ENST00000497203 PLEKHH1Q9ULM0 1364 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 IGHV3OR16-13A0A075B7E8 117 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 IGHV1OR21-1A0A087WYE8 117 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 TCRBV9S1A1TA0A576 114 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 NCK1P16333 377 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 SHMT2P34897 504 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 SEC61GP60059 68 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 TIMM10P62072 90 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 RPS14P62263 151 aaKnown RBP2.88□□□□□ -1.95
SMC4-225ENST00000497203 CSNK1G2P78368 415 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 ARFRP1Q13795 201 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 GRB7Q14451 532 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 OXA1LQ15070 435 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 SSX2Q16385 188 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 MICBQ29980 383 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 RABL6Q3YEC7 729 aaPredicted RBP2.88□□□□□ -1.95
SMC4-225ENST00000497203 PARP15Q460N3 678 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 OR52E8Q6IFG1 317 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 PGAP1Q75T13 922 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 NANOGNBQ7Z5D8 188 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 CNPY4Q8N129 248 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 UBE2J2Q8N2K1 259 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 OR2L5Q8NG80 312 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 OR4K14Q8NGD5 310 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 SETD7Q8WTS6 366 aaKnown RBP2.88□□□□□ -1.95
SMC4-225ENST00000497203 UFD1Q92890 307 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 TPD52L3Q96J77 140 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 IFT74Q96LB3 600 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 TCEANC2Q96MN5 208 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 MTMR9Q96QG7 549 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 TCHPQ9BT92 498 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 POLR2J2Q9GZM3 115 aaKnown RBP2.88□□□□□ -1.95
SMC4-225ENST00000497203 POLR2J3Q9H1A7 115 aaKnown RBP2.88□□□□□ -1.95
SMC4-225ENST00000497203 ABCG2Q9UNQ0 655 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 RRP15Q9Y3B9 282 aaKnown RBP2.88□□□□□ -1.95
SMC4-225ENST00000497203 UGT2A1Q9Y4X1 527 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 V9GY05 133 aa2.88□□□□□ -1.95
SMC4-225ENST00000497203 ADAMTS9Q9P2N4 1935 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 IGKV6D-41A0A0C4DH26 115 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 A0A0G2JRQ6 117 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 A0A1B0GVL5 298 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 CCDC182A6NF36 153 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 LOC110117498-PIK3R3F6TDL0 507 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 UBXN8O00124 270 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 MMP23AO75900 390 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 STAMBPO95630 424 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 OXSR1O95747 527 aaPredicted RBP2.87□□□□□ -1.95
SMC4-225ENST00000497203 LGI1O95970 557 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 RBMY1CP0DJD4 496 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 SLC2A3P11169 496 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 RDXP35241 583 aaKnown RBP2.87□□□□□ -1.95
SMC4-225ENST00000497203 DDOSTP39656 456 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 KIR2DS4P43632 304 aa2.87□□□□□ -1.95
SMC4-225ENST00000497203 GYG1P46976 350 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms