RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 KLK7P49862 253 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 HNMTP50135 292 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 ARFIP1P53367 373 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 PKNOX1P55347 436 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 RAP1BP61224 184 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 TGFBR3Q03167 851 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 DAZ2Q13117 558 aaKnown RBP3.21□□□□□ -1.9
VPS36-206ENST00000497149 ARFRP1Q13795 201 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 NSDHLQ15738 373 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 SLC15A2Q16348 729 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 SFT2D3Q587I9 215 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 CASC10Q5T4H9 136 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 OR4F3Q6IEY1 312 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 CCDC65Q8IXS2 484 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 ARL6IP6Q8N6S5 226 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 LINC01555Q8NAE3 123 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 OR4K14Q8NGD5 310 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 NEIL3Q8TAT5 605 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 ANP32BQ92688 251 aaKnown RBP3.21□□□□□ -1.9
VPS36-206ENST00000497149 FGF11Q92914 225 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 UBE2E3Q969T4 207 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 CRACR2AQ9BSW2 395 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 REEP4Q9H6H4 257 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 DAZ3Q9NR90 486 aaKnown RBP3.21□□□□□ -1.9
VPS36-206ENST00000497149 SMPD3Q9NY59 655 aaPredicted RBP3.21□□□□□ -1.9
VPS36-206ENST00000497149 STAP1Q9ULZ2 295 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 ASF1AQ9Y294 204 aa3.21□□□□□ -1.9
VPS36-206ENST00000497149 RPAP1Q9BWH6 1393 aaPredicted RBP3.21□□□□□ -1.9
VPS36-206ENST00000497149 TRAV26-1A0A087WT03 109 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 RGS16O15492 202 aaPredicted RBP3.2□□□□□ -1.9
VPS36-206ENST00000497149 POLR2DO15514 142 aaKnown RBP3.2□□□□□ -1.9
VPS36-206ENST00000497149 PRKAB2O43741 272 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 UGT1A9O60656 530 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 MGMTP16455 207 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 CCNE1P24864 410 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 GNA11P29992 359 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 SHMT2P34897 504 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 DDOSTP39656 456 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 CTRLP40313 264 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 KIR2DS4P43632 304 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 HLCSP50747 726 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 SELENOTP62341 195 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 ZNF763Q0D2J5 394 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 KLRB1Q12918 225 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 GPM6BQ13491 265 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 PDK3Q15120 406 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 EXOC3L2Q2M3D2 409 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 LRRC23Q53EV4 343 aaPredicted RBP3.2□□□□□ -1.9
VPS36-206ENST00000497149 OR2G6Q5TZ20 316 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 ZSCAN25Q6NSZ9 544 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 RDH10Q8IZV5 341 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 OR51S1Q8NGJ8 323 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 UCN3Q969E3 161 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 RPUSD4Q96CM3 377 aaKnown RBP3.2□□□□□ -1.9
VPS36-206ENST00000497149 RBM14Q96PK6 669 aaKnown RBP3.2□□□□□ -1.9
VPS36-206ENST00000497149 TSG101Q99816 390 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 HES7Q9BYE0 225 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 C20orf85Q9H1P6 137 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 VCX2Q9H322 139 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 SLC25A22Q9H936 323 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 TMCC3Q9ULS5 477 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 RPL36Q9Y3U8 105 aaKnown RBP3.2□□□□□ -1.9
VPS36-206ENST00000497149 NEUROG3Q9Y4Z2 214 aa3.2□□□□□ -1.9
VPS36-206ENST00000497149 SYNRGQ9UMZ2 1314 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 PINLYPA6NC86 204 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 MBTPS2O43462 519 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 NPIPB7O75200 414 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 ATP5LO75964 103 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 P04436 131 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 CAPN1P07384 714 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 TPM2P07951 284 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 NR2C1P13056 603 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 POU2F1P14859 743 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 CXCR2P25025 360 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 ANP32AP39687 249 aaKnown RBP3.19□□□□□ -1.9
VPS36-206ENST00000497149 TNNT2P45379 298 aaPredicted RBP3.19□□□□□ -1.9
VPS36-206ENST00000497149 KPNA2P52292 529 aaKnown RBP3.19□□□□□ -1.9
VPS36-206ENST00000497149 GBX2P52951 348 aaPredicted RBP3.19□□□□□ -1.9
VPS36-206ENST00000497149 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 PRPS1P60891 318 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 UBE2HP62256 183 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 FGL1Q08830 312 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 ASPHQ12797 758 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 VGLL4Q14135 290 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 PARP15Q460N3 678 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 BCL7AQ4VC05 210 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 PAGE3Q5JUK9 113 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 C1orf100Q5SVJ3 147 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 TIGD3Q6B0B8 471 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 TMIGD1Q6UXZ0 262 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 Q6ZPB1 254 aaPredicted RBP3.19□□□□□ -1.9
VPS36-206ENST00000497149 RNF165Q6ZSG1 346 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 PRSS41Q7RTY9 318 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 ZNF571Q7Z3V5 609 aaPredicted RBP3.19□□□□□ -1.9
VPS36-206ENST00000497149 PNKDQ8N490 385 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 SUMF2Q8NBJ7 301 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 MFSD9Q8NBP5 474 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 OR10G3Q8NGC4 313 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 FBXO30Q8TB52 745 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 MYDGFQ969H8 173 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms