RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 TMEM229AB2RXF0 380 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 CLOCKO15516 846 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 ZNF208O43345 1280 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 UQCRBP14927 111 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 COX5AP20674 150 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 HTR3AP46098 478 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 H3F3AP84243 136 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 LGALS3BPQ08380 585 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 ITGADQ13349 1161 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 ADRM1Q16186 407 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 ACKR1Q16570 336 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 RUNDC3AQ59EK9 446 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 OTUD3Q5T2D3 398 aaPredicted RBP10.78□□□□□ -0.68
HDLBP-246ENST00000496569 PTOV1Q86YD1 416 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 UBE2J2Q8N2K1 259 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 KBTBD8Q8NFY9 601 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 PERPQ96FX8 193 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 ZNF385AQ96PM9 386 aaKnown RBP10.78□□□□□ -0.68
HDLBP-246ENST00000496569 CCL19Q99731 98 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 TACO1Q9BSH4 297 aaKnown RBP10.78□□□□□ -0.68
HDLBP-246ENST00000496569 TMUB1Q9BVT8 246 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 PIF1Q9H611 641 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 CACYBPQ9HB71 228 aaKnown RBP10.78□□□□□ -0.68
HDLBP-246ENST00000496569 NPAP1Q9NZP6 1156 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 EMC3Q9P0I2 261 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 LEF1Q9UJU2 399 aaPredicted RBP10.78□□□□□ -0.68
HDLBP-246ENST00000496569 ZNF232Q9UNY5 417 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 USP22Q9UPT9 525 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 IFT52Q9Y366 437 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 FLVCR1Q9Y5Y0 555 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 ZANQ9Y493 2812 aa10.78□□□□□ -0.68
HDLBP-246ENST00000496569 A0A1B0GWA3 101 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 FBP2O00757 339 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 ITGA5P08648 1049 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 CD99P14209 185 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 PPP3CBP16298 524 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 GPX2P18283 190 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 CBLP22681 906 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 CLK1P49759 484 aaKnown RBP10.77□□□□□ -0.69
HDLBP-246ENST00000496569 P2RY4P51582 365 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 SLC16A1P53985 500 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 COPZ1P61923 177 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 SLC35A1P78382 337 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 GUCY1A3Q02108 690 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 EGR4Q05215 589 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 DMTNQ08495 405 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 SPOCK1Q08629 439 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 FAPQ12884 760 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 NFYCQ13952 458 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 TSPO2Q5TGU0 170 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 C1orf140Q5VVS0 124 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 REEP3Q6NUK4 255 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 ADAM5Q6NVV9 412 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 KDM8Q8N371 416 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 ZNF433Q8N7K0 673 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-246ENST00000496569 SMYD1Q8NB12 490 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 OR52N5Q8NH56 324 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 LILRB1Q8NHL6 650 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-246ENST00000496569 AKAP1Q92667 903 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDLBP-246ENST00000496569 PMM1Q92871 262 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 APH1AQ96BI3 265 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 SLC25A36Q96CQ1 311 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 CGREF1Q99674 301 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 PTDSS2Q9BVG9 487 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 POTEKPQ9BYX7 375 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 GSX1Q9H4S2 264 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-246ENST00000496569 FANCFQ9NPI8 374 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 SLC7A10Q9NS82 523 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 THUMPD1Q9NXG2 353 aaKnown RBP10.77□□□□□ -0.69
HDLBP-246ENST00000496569 NDUFAF1Q9Y375 327 aa10.77□□□□□ -0.69
HDLBP-246ENST00000496569 CR1P17927 2039 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 IGKV1D-42A0A075B6H8 117 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 DPRXA6NFQ7 191 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 CCT8L1PA6NM43 557 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 EVPLLA8MZ36 301 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 M0R3H8 397 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 ANGPT2O15123 496 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 DNPH1O43598 174 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 TPST2O60704 377 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 NPIPB7O75200 414 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 MRPL33O75394 65 aaKnown RBP10.76□□□□□ -0.69
HDLBP-246ENST00000496569 GPIP06744 558 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 ETS2P15036 469 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 RPS5P46782 204 aaKnown RBP10.76□□□□□ -0.69
HDLBP-246ENST00000496569 NKX6-1P78426 367 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-246ENST00000496569 SLC25A3Q00325 362 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 BSPH1Q075Z2 132 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 SLC17A1Q14916 467 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 PDK3Q15120 406 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 CYP51A1Q16850 503 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 Q5PR19 223 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 NCMAPQ5T1S8 102 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 PRAMEF8Q5VWM4 474 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 PRAMEF7Q5VXH5 474 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 FBXW9Q5XUX1 488 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 DHRS4L2Q6PKH6 230 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 PAQR6Q6TCH4 344 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 GPAT4Q86UL3 456 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 ZIC4Q8N9L1 334 aa10.76□□□□□ -0.69
HDLBP-246ENST00000496569 RNF217Q8TC41 542 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms