RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 NGBQ9NPG2 151 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 PCDHB14Q9Y5E9 798 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 MAGED1Q9Y5V3 778 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-209ENST00000496445 FLVCR1Q9Y5Y0 555 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 CR1P17927 2039 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 FAM234BA2RU67 622 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 OR5H1A6NKK0 313 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 OVOL3O00110 214 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 PDLIM1O00151 329 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 GPR171O14626 319 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 THBS1P07996 1170 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 ITGA5P08648 1049 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 PRG2P13727 222 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 UQCRBP14927 111 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 ATP5J2P56134 94 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 SLC17A1Q14916 467 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 PGGHGQ32M88 737 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 CASP12Q6UXS9 341 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 FUNDC1Q8IVP5 155 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 MSRB3Q8IXL7 192 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 ZNF440Q8IYI8 595 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 UBE2J2Q8N2K1 259 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 OR52E4Q8NGH9 312 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 SMAP2Q8WU79 429 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-209ENST00000496445 BDH2Q9BUT1 245 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 RSPO3Q9BXY4 272 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-209ENST00000496445 CALML5Q9NZT1 146 aa12.57□□□□□ -0.4
VTI1A-209ENST00000496445 CSPG4Q6UVK1 2322 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 A0A1W2PR80 420 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 LIPT2A6NK58 231 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 EIF1BO60739 113 aaKnown RBP12.56□□□□□ -0.4
VTI1A-209ENST00000496445 MRPL33O75394 65 aaKnown RBP12.56□□□□□ -0.4
VTI1A-209ENST00000496445 IDUAP35475 653 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 CDKN1AP38936 164 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 MAP2K6P52564 334 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 CDH11P55287 796 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 SPOCK1Q08629 439 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 FAPQ12884 760 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 BNIP2Q12982 314 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 RGNQ15493 299 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 TTMPQ5BVD1 217 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 PAQR6Q6TCH4 344 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 SERPINA11Q86U17 422 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 P2RY8Q86VZ1 359 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 C10orf111Q8N326 155 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 CADM2Q8N3J6 435 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 MAL2Q969L2 176 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 MUCL1Q96DR8 90 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 AMBRA1Q9C0C7 1298 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 A4GALTQ9NPC4 353 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 SLC52A3Q9NQ40 469 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 TCF7L2Q9NQB0 619 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 ASB6Q9NWX5 421 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 TAS2R16Q9NYV7 291 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 SLC25A37Q9NYZ2 338 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 SLC9A8Q9Y2E8 581 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 SLC25A15Q9Y619 301 aa12.56□□□□□ -0.4
VTI1A-209ENST00000496445 A0A096LPI6 279 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 A0A0G2JPF8 293 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 FAM171A2A8MVW0 826 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 TMEM229AB2RXF0 380 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 HNRNPCL2B2RXH8 293 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 HNRNPCL3B7ZW38 293 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 ABCD4O14678 606 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 POLR3GO15318 223 aaPredicted RBP12.55□□□□□ -0.4
VTI1A-209ENST00000496445 FRS3O43559 492 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 HNRNPCL1O60812 293 aaKnown RBP12.55□□□□□ -0.4
VTI1A-209ENST00000496445 AKR7A3O95154 331 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 CD8AP01732 235 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 HNRNPCL4P0DMR1 293 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 BMP2P12643 396 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 CXCR1P25024 350 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 IDH3AP50213 366 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 P2RY4P51582 365 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 SLC25A3Q00325 362 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 FADDQ13158 208 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 CEACAM7Q14002 265 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 LARS2Q15031 903 aaKnown RBP12.55□□□□□ -0.4
VTI1A-209ENST00000496445 OR7A5Q15622 319 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 GABRA6Q16445 453 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 OTUD3Q5T2D3 398 aaPredicted RBP12.55□□□□□ -0.4
VTI1A-209ENST00000496445 LRIF1Q5T3J3 769 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 TSPO2Q5TGU0 170 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 WBP2NLQ6ICG8 309 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 TMEM99Q8N816 258 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 ZIC4Q8N9L1 334 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 OR52N5Q8NH56 324 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 TMEM45BQ96B21 275 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 C3orf49Q96BT1 292 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 ZNF385AQ96PM9 386 aaKnown RBP12.55□□□□□ -0.4
VTI1A-209ENST00000496445 NAA11Q9BSU3 229 aaPredicted RBP12.55□□□□□ -0.4
VTI1A-209ENST00000496445 TRAF4Q9BUZ4 470 aaPredicted RBP12.55□□□□□ -0.4
VTI1A-209ENST00000496445 SPATA9Q9BWV2 254 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 BCL2L10Q9HD36 194 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 SLC7A10Q9NS82 523 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 THUMPD1Q9NXG2 353 aaKnown RBP12.55□□□□□ -0.4
VTI1A-209ENST00000496445 SLAMF8Q9P0V8 285 aa12.55□□□□□ -0.4
VTI1A-209ENST00000496445 A0A1W2PP18 115 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 CIB4A0PJX0 185 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 AQP7P3A6NL99 342 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms