RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 PEX5LQ8IYB4 626 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 GABRG1Q8N1C3 465 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 ZNF611Q8N823 705 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 OR5W2Q8NH69 310 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 GPR119Q8TDV5 335 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 WDR60Q8WVS4 1066 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 AKAP1Q92667 903 aaKnown RBP eCLIP12.78□□□□□ -0.36
CXCL12-208ENST00000496375 MAL2Q969L2 176 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 RCN3Q96D15 328 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 CMTM5Q96DZ9 223 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 TACO1Q9BSH4 297 aaKnown RBP12.78□□□□□ -0.36
CXCL12-208ENST00000496375 QRSL1Q9H0R6 528 aaKnown RBP12.78□□□□□ -0.36
CXCL12-208ENST00000496375 CXorf56Q9H5V9 222 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 COQ10BQ9H8M1 238 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 GID8Q9NWU2 228 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 KLHL13Q9P2N7 655 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 IFT52Q9Y366 437 aa12.78□□□□□ -0.36
CXCL12-208ENST00000496375 CSPG4Q6UVK1 2322 aa12.77□□□□□ -0.36
CXCL12-208ENST00000496375 JMJD1CQ15652 2540 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 CDHR4A6H8M9 788 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 EBAG9O00559 213 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 GCM2O75603 506 aaPredicted RBP12.77□□□□□ -0.37
CXCL12-208ENST00000496375 PAX1P15863 534 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 PRKCAP17252 672 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 SLC6A2P23975 617 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 IL32P24001 234 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 PCSK6P29122 969 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 SELENBP1Q13228 472 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 CAPRIN1Q14444 709 aaKnown RBP12.77□□□□□ -0.37
CXCL12-208ENST00000496375 LIN52Q52LA3 116 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 GKAP1Q5VSY0 366 aaPredicted RBP12.77□□□□□ -0.37
CXCL12-208ENST00000496375 ARPINQ7Z6K5 226 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 SLC30A8Q8IWU4 369 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 TMCO5AQ8N6Q1 288 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 POU5F2Q8N7G0 328 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 C11orf65Q8NCR3 313 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 HIPK4Q8NE63 616 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 OR52P1PQ8NH57 321 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 ST8SIA1Q92185 356 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 ZNF524Q96C55 264 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 THUMPD3Q9BV44 507 aaKnown RBP12.77□□□□□ -0.37
CXCL12-208ENST00000496375 HDHD5Q9BXW7 423 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 GP6Q9HCN6 339 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 ZNF701Q9NV72 531 aaPredicted RBP12.77□□□□□ -0.37
CXCL12-208ENST00000496375 CHST2Q9Y4C5 530 aa12.77□□□□□ -0.37
CXCL12-208ENST00000496375 IGHV3-15A0A0B4J1V0 119 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 A0A1W2PNR3 127 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 CLDN24A6NM45 220 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 NDUFAB1O14561 156 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 TMCC2O75069 709 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 BCAS1O75363 584 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-208ENST00000496375 PRKD3O94806 890 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 YES1P07947 543 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 IL7RP16871 459 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 ENPP1P22413 925 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 SLC7A1P30825 629 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 PCGF2P35227 344 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 CCR4P51679 360 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 CBFBQ13951 182 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 SCARB2Q14108 478 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 QPRTQ15274 297 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 RABL3Q5HYI8 236 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 RPS26P11Q5JNZ5 115 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-208ENST00000496375 SFRP5Q5T4F7 317 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 MRPL2Q5T653 305 aaKnown RBP12.76□□□□□ -0.37
CXCL12-208ENST00000496375 ZNF836Q6ZNA1 936 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 ZNF440Q8IYI8 595 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 SLC43A2Q8N370 569 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 NFKBIDQ8NI38 313 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 MRGPRX4Q96LA9 322 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 LRRC37BQ96QE4 947 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 RSPO3Q9BXY4 272 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-208ENST00000496375 EFCAB1Q9HAE3 211 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 LAMP3Q9UQV4 416 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 ZNF443Q9Y2A4 671 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-208ENST00000496375 AP3M1Q9Y2T2 418 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 HIVEP2P31629 2446 aa12.76□□□□□ -0.37
CXCL12-208ENST00000496375 C5orf58C9J3I9 102 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 CLOCKO15516 846 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 ADAM11O75078 769 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 CYP7B1O75881 506 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 ADAP00813 363 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 UBTFL6P0CB48 400 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-208ENST00000496375 PGCP20142 388 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 PRKAR1BP31321 381 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 ATP5J2P56134 94 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 RAC3P60763 192 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 RPS4XP62701 263 aaKnown RBP12.75□□□□□ -0.37
CXCL12-208ENST00000496375 VEZF1Q14119 521 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 LARS2Q15031 903 aaKnown RBP12.75□□□□□ -0.37
CXCL12-208ENST00000496375 CYP51A1Q16850 503 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 DHRS4L2Q6PKH6 230 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 CCDC80Q76M96 950 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 VRK2Q86Y07 508 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 OR10A6Q8NH74 314 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 CNOT9Q92600 299 aaKnown RBP12.75□□□□□ -0.37
CXCL12-208ENST00000496375 KISS1RQ969F8 398 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-208ENST00000496375 ZNF583Q96ND8 569 aa12.75□□□□□ -0.37
CXCL12-208ENST00000496375 HOPXQ9BPY8 73 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-208ENST00000496375 KLHL9Q9P2J3 617 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms