RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 ZNF525Q8N782 197 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 FAM47BQ8NA70 645 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 C9orf106Q8NAJ2 232 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 SYT8Q8NBV8 401 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 PAPD5Q8NDF8 572 aaKnown RBP4.1□□□□□ -1.75
XPA-204ENST00000496104 ACVR1CQ8NER5 493 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 OR2M7Q8NG81 312 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 OR14L1PQ8NHC6 308 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 FAM81AQ8TBF8 368 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 WIPF2Q8TF74 440 aaPredicted RBP4.1□□□□□ -1.75
XPA-204ENST00000496104 CHPT1Q8WUD6 406 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 ATG4AQ8WYN0 398 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 NEUROG1Q92886 237 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 FAM136AQ96C01 138 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 FBXL8Q96CD0 374 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 NTNG2Q96CW9 530 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 ZC3HAV1LQ96H79 300 aaKnown RBP4.1□□□□□ -1.75
XPA-204ENST00000496104 SFXN2Q96NB2 322 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 LRRC37BQ96QE4 947 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 CPNE1Q99829 537 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 KCNS3Q9BQ31 491 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 SPATA16Q9BXB7 569 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 GON7Q9BXV9 100 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 SRMSQ9H3Y6 488 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 RGCCQ9H4X1 137 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 MAGIXQ9H6Y5 334 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 EVA1AQ9H8M9 152 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 PCDH9Q9HC56 1237 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 PKD2L2Q9NZM6 624 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 CTTNBP2NLQ9P2B4 639 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 CTNNAL1Q9UBT7 734 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 ERVK-11Q9UQG0 969 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 SH2B3Q9UQQ2 575 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 KLF13Q9Y2Y9 288 aaPredicted RBP4.1□□□□□ -1.75
XPA-204ENST00000496104 SRPRBQ9Y5M8 271 aaKnown RBP4.1□□□□□ -1.75
XPA-204ENST00000496104 PTGDR2Q9Y5Y4 395 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 ALMS1Q8TCU4 4167 aa4.1□□□□□ -1.75
XPA-204ENST00000496104 TRAV6A0A075B6T7 132 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 IGHV4-61A0A0C4DH41 118 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 A0A0J9YY10 115 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 A0A1W2PPQ1 181 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 A0A1W2PS29 197 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 TMEM129A0AVI4 362 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 RBMY1BA6NDE4 496 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 BTBD17A6NE02 478 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 RBMY1EA6NEQ0 496 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 C9orf118A6NHY6 69 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 C2orf74A8MZ97 194 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 G3V3Y1 287 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 FOXS1O43638 330 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 LANCL1O43813 399 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 SSX4O60224 188 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 ZNF354AO60765 605 aaPredicted RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 KLHL2O95198 593 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 TGM6O95932 706 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 IGFBP1P08833 259 aaPredicted RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 RBMY1DP0C7P1 496 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 FCGR2AP12318 317 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 ICAM2P13598 275 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 APEHP13798 732 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 LBPP18428 481 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 HNF1AP20823 631 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 PSMB4P28070 264 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 FCGR2BP31994 310 aaPredicted RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 LIPAP38571 399 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 GRIA3P42263 894 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 SLCO1A2P46721 670 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 CYB561P49447 251 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 HMGA2P52926 109 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 KRTAP10-3P60369 221 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 YWHAEP62258 255 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 TUBA1BP68363 451 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 MAT1AQ00266 395 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 TRAP1Q12931 704 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 RIN1Q13671 783 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 SLC10A1Q14973 349 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 TSTD2Q5T7W7 516 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 WLSQ5T9L3 541 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 TEDDM1Q5T9Z0 273 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 CLEC6AQ6EIG7 209 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 PRR27Q6MZM9 219 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 ZNF474Q6S9Z5 364 aaPredicted RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 FAM159AQ6UWV7 190 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 KCTD8Q6ZWB6 473 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 TUBA1AQ71U36 451 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 TRPM8Q7Z2W7 1104 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 CPEB2Q7Z5Q1 589 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 AMIGO1Q86WK6 493 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 KATNAL2Q8IYT4 538 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 GCNT2Q8N0V5 402 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 ZNF441Q8N8Z8 693 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 OR4C5Q8NGB2 326 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 M1APQ8TC57 530 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 C10orf105Q8TEF2 133 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 GIPC3Q8TF64 312 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 LCN9Q8WX39 176 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 AKAP1Q92667 903 aaKnown RBP eCLIP4.09□□□□□ -1.75
XPA-204ENST00000496104 DACT3Q96B18 629 aaPredicted RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 SPDL1Q96EA4 605 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 DAZAP1Q96EP5 407 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms