RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 ANKRD9Q96BM1 317 aaPredicted RBP11.96□□□□□ -0.5
PTPN7-217ENST00000495688 CTHRC1Q96CG8 243 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 GFI1Q99684 422 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 HEXA-AS1Q9H8Q6 139 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 POT1Q9NUX5 634 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 TRAV1-2A0A0B4J238 106 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 A0A1W2PQF6 199 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF593O00488 134 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-217ENST00000495688 GPR171O14626 319 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 PIN1P1O15428 100 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 H2AFB2P0C5Z0 115 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 EDNRAP25101 427 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 GDNFP39905 211 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 ARHGAP11AQ6P4F7 1023 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 SLC35F2Q8IXU6 374 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 CA13Q8N1Q1 262 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 TEX19Q8NA77 164 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 OR6K6Q8NGW6 343 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 HMGB4Q8WW32 186 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 MYADMQ96S97 322 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 CNN2Q99439 309 aaKnown RBP11.95□□□□□ -0.5
PTPN7-217ENST00000495688 LYRM4Q9HD34 91 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 EMC7Q9NPA0 242 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 NOX4Q9NPH5 578 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 OBP2AQ9NY56 170 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 ELF5Q9UKW6 265 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-217ENST00000495688 A0A1B0GVT2 93 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 ANKRD61A6NGH8 418 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 PRR32B1ATL7 298 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 IFNGP01579 166 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 UCHL1P09936 223 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF10P21506 573 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-217ENST00000495688 RPL4P36578 427 aaKnown RBP11.95□□□□□ -0.5
PTPN7-217ENST00000495688 ARPC4P59998 168 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 ZP1P60852 638 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 KLF9Q13886 244 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-217ENST00000495688 FGFBP1Q14512 234 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 NFATC4Q14934 902 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 ITPRIPL2Q3MIP1 535 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 CD276Q5ZPR3 534 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF433Q8N7K0 673 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-217ENST00000495688 OR9A4Q8NGU2 314 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 RASD2Q96D21 266 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 OR2M2Q96R28 347 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.95□□□□□ -0.5
PTPN7-217ENST00000495688 SERTAD3Q9UJW9 196 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 RWDD3Q9Y3V2 267 aa11.95□□□□□ -0.5
PTPN7-217ENST00000495688 TDRD6O60522 2096 aaKnown RBP11.95□□□□□ -0.5
PTPN7-217ENST00000495688 OR6C68A6NDL8 312 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ZSCAN5BA6NJL1 495 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 SSNA1O43805 119 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 GALR3O60755 368 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 SLC22A5O76082 557 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 NKX2-2O95096 273 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 GBX2P52951 348 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 CAMK2DQ13557 499 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 LGALSLQ3ZCW2 172 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 NUDT18Q6ZVK8 323 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 LINGO2Q7L985 606 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 PIAS4Q8N2W9 510 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF527Q8NB42 609 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 SLC2A12Q8TD20 617 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ADAMTS14Q8WXS8 1223 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 WDR92Q96MX6 357 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 DPCDQ9BVM2 203 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 RANBP3Q9H6Z4 567 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 FKRPQ9H9S5 495 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ABRACLQ9P1F3 81 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 SPATA2Q9UM82 520 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 RCE1Q9Y256 329 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 PCDHGA9Q9Y5G4 932 aaKnown RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 OR10H2O60403 315 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ARL6IP5O75915 188 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 OR2T7P0C7T2 308 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 NTSR1P30989 418 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 SELENOPP49908 381 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 NANOS3P60323 173 aaKnown RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ANGPT1Q15389 498 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 CDONQ4KMG0 1287 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 HSD17B12Q53GQ0 312 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ESCO2Q56NI9 601 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF542PQ5EBM4 170 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 SDE2Q6IQ49 451 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 FAAP20Q6NZ36 180 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF782Q6ZMW2 699 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 CSNK1A1LQ8N752 337 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 OR2T27Q8NH04 317 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 MAP6Q96JE9 813 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 SPACA7Q96KW9 195 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 HSPA12BQ96MM6 686 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 TSSK2Q96PF2 358 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 TCEAL2Q9H3H9 227 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ZCCHC4Q9H5U6 513 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 FAM60AQ9NP50 221 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 C14orf105Q9NVL8 296 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 NCDNQ9UBB6 729 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 KLK11Q9UBX7 282 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 PCOLCE2Q9UKZ9 415 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ICAM5Q9UMF0 924 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 SPACA6W5XKT8 324 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms