RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CLEC4FQ8N1N0 589 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 FAM71CQ8NEG0 241 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 OR4A15Q8NGL6 344 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 TMEM45BQ96B21 275 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 KATNB1Q9BVA0 655 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 PLA2G12AQ9BZM1 189 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 SERHL2Q9H4I8 314 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 EXOSC3Q9NQT5 275 aaKnown RBP12.42□□□□□ -0.42
VARS-228ENST00000495010 POLE3Q9NRF9 147 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 TMED7Q9Y3B3 224 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 PCDHB14Q9Y5E9 798 aa12.42□□□□□ -0.42
VARS-228ENST00000495010 ZNF208O43345 1280 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 SPRY1O43609 319 aaPredicted RBP12.41□□□□□ -0.42
VARS-228ENST00000495010 NPHS1O60500 1241 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 PDE5AO76074 875 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 FAM153BP0C7A2 387 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 DAOP14920 347 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 UQCRBP14927 111 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 PCMT1P22061 227 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 PPOXP50336 477 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 IDH3GP51553 393 aaPredicted RBP12.41□□□□□ -0.42
VARS-228ENST00000495010 KCNJ10P78508 379 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 MAD2L1Q13257 205 aaPredicted RBP12.41□□□□□ -0.42
VARS-228ENST00000495010 GPAT3Q53EU6 434 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 XKR7Q5GH72 579 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 TYW3Q6IPR3 259 aaKnown RBP12.41□□□□□ -0.42
VARS-228ENST00000495010 UGT2A3Q6UWM9 527 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 CLECL1Q8IZS7 167 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 C4orf33Q8N1A6 199 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 NEU4Q8WWR8 484 aaPredicted RBP12.41□□□□□ -0.42
VARS-228ENST00000495010 HPS1Q92902 700 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 ROPN1LQ96C74 230 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 TUBGCP3Q96CW5 907 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 AURKBQ96GD4 344 aaPredicted RBP12.41□□□□□ -0.42
VARS-228ENST00000495010 SOX7Q9BT81 388 aa12.41□□□□□ -0.42
VARS-228ENST00000495010 NUP214P35658 2090 aaPredicted RBP12.41□□□□□ -0.42
VARS-228ENST00000495010 ARFGEF3Q5TH69 2177 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 TMEM72A0PK05 275 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 ZNF587BE7ETH6 402 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 WIPF1O43516 503 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 SCN2BO60939 215 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 BCAS1O75363 584 aaPredicted RBP12.4□□□□□ -0.42
VARS-228ENST00000495010 GUSBP08236 651 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 IMPDH2P12268 514 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 CFPP27918 469 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 TACR3P29371 465 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 MAP2K6P52564 334 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 EFNB3Q15768 340 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 ADIPOQQ15848 244 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 TBRG1Q3YBR2 411 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 OR4F3Q6IEY1 312 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 TNFAIP8L2Q6P589 184 aaPredicted RBP12.4□□□□□ -0.42
VARS-228ENST00000495010 PAQR6Q6TCH4 344 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 HMGN2P46Q86SG4 172 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 GPAT4Q86UL3 456 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 RIMKLAQ8IXN7 391 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.4□□□□□ -0.42
VARS-228ENST00000495010 OR4F15Q8NGB8 312 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 MIPOL1Q8TD10 442 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 C3orf30Q96M34 536 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 SF3B5Q9BWJ5 86 aaKnown RBP12.4□□□□□ -0.42
VARS-228ENST00000495010 PLK3Q9H4B4 646 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 PPCSQ9HAB8 311 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 MOV10Q9HCE1 1003 aaKnown RBP12.4□□□□□ -0.42
VARS-228ENST00000495010 OSGIN1Q9UJX0 560 aa12.4□□□□□ -0.42
VARS-228ENST00000495010 hCG_2039718K7EN88 272 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 RNASET2O00584 256 aaKnown RBP12.39□□□□□ -0.43
VARS-228ENST00000495010 AKR7A3O95154 331 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 CPSF4O95639 269 aaKnown RBP12.39□□□□□ -0.43
VARS-228ENST00000495010 GPIP06744 558 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 G6PDP11413 515 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 UQCRC2P22695 453 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 GIFP27352 417 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 ALDH3A1P30838 453 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 KHKP50053 298 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 CLDN8P56748 225 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 NAAAQ02083 359 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 CEACAM7Q14002 265 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 GNA13Q14344 377 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 OR7A5Q15622 319 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 TMEM225Q6GV28 225 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 ANKRD16Q6P6B7 361 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 FRRS1Q6ZNA5 592 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 RINLQ6ZS11 566 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 VPS37AQ8NEZ2 397 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 OR9K2Q8NGE7 335 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 OR1K1Q8NGR3 316 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 WDR60Q8WVS4 1066 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 UBLCP1Q8WVY7 318 aaPredicted RBP12.39□□□□□ -0.43
VARS-228ENST00000495010 RAB8BQ92930 207 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 ZNF385AQ96PM9 386 aaKnown RBP12.39□□□□□ -0.43
VARS-228ENST00000495010 SNX18Q96RF0 628 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 SAP130Q9H0E3 1048 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 DYNLRB1Q9NP97 96 aa12.39□□□□□ -0.43
VARS-228ENST00000495010 A0A0A6YYJ9 748 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 OR6C65A6NJZ3 312 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 CLDN24A6NM45 220 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 SLCO1B7G3V0H7 640 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 AP3D1O14617 1153 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms