RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 PIAS4Q8N2W9 510 aaPredicted RBP20.85■□□□□ 0.93
RHBDD3-206ENST00000493894 TLCD1Q96CP7 247 aa20.85■□□□□ 0.93
RHBDD3-206ENST00000493894 TRAF4Q9BUZ4 470 aaPredicted RBP20.85■□□□□ 0.93
RHBDD3-206ENST00000493894 ADAM19Q9H013 955 aa20.85■□□□□ 0.93
RHBDD3-206ENST00000493894 PARPBPQ9NWS1 579 aa20.85■□□□□ 0.93
RHBDD3-206ENST00000493894 THUMPD1Q9NXG2 353 aaKnown RBP20.85■□□□□ 0.93
RHBDD3-206ENST00000493894 ZNF443Q9Y2A4 671 aaPredicted RBP20.85■□□□□ 0.93
RHBDD3-206ENST00000493894 FLVCR1Q9Y5Y0 555 aa20.85■□□□□ 0.93
RHBDD3-206ENST00000493894 TMEM247A6NEH6 219 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 GPIP06744 558 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 CXCR1P25024 350 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 PTAFRP25105 342 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 POLR2JP52435 117 aaKnown RBP20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 COPZ1P61923 177 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 GTDC1Q4AE62 458 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 OTUD3Q5T2D3 398 aaPredicted RBP20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 RNF220Q5VTB9 566 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 DTX2Q86UW9 622 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 LSRQ86X29 649 aaPredicted RBP20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 MIER2Q8N344 545 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 OR52E4Q8NGH9 312 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 OR9I1Q8NGQ6 314 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 OR52B2Q96RD2 323 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 TMBIM4Q9HC24 238 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 UPB1Q9UBR1 384 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 PRDM4Q9UKN5 801 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 MGAT4BQ9UQ53 548 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 SLC25A15Q9Y619 301 aa20.84■□□□□ 0.93
RHBDD3-206ENST00000493894 KLF11O14901 512 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 THBS1P07996 1170 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 ITGA5P08648 1049 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 GKN3PP0CG01 181 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 ZNF83P51522 516 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 SLC17A1Q14916 467 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 LARS2Q15031 903 aaKnown RBP20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 GABRA6Q16445 453 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 ZSWIM7Q19AV6 140 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 WBP2NLQ6ICG8 309 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 CADM2Q8N3J6 435 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 SLC38A5Q8WUX1 472 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 AURKBQ96GD4 344 aaPredicted RBP20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 TMEM19Q96HH6 336 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 HS6ST2Q96MM7 605 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 GRIP2Q9C0E4 1043 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 SLCO5A1Q9H2Y9 848 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 DCTN4Q9UJW0 460 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 POU2F3Q9UKI9 436 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 CADP27708 2225 aa20.83■□□□□ 0.93
RHBDD3-206ENST00000493894 HIVEP2P31629 2446 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 A0A1W2PR80 420 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 LIPT2A6NK58 231 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 INAFM1C9JVW0 142 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 TFPTP0C1Z6 253 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 CEACAM7Q14002 265 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 OR7A5Q15622 319 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 RPS26P11Q5JNZ5 115 aaPredicted RBP20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 SLC22A25Q6T423 547 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 C17orf78Q8N4C9 275 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 C1orf162Q8NEQ5 155 aaPredicted RBP20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 VPS33AQ96AX1 596 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 TMEM45BQ96B21 275 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 MUS81Q96NY9 551 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 TAPBPLQ9BX59 468 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 AMBRA1Q9C0C7 1298 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 ARMC7Q9H6L4 198 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 BARX1Q9HBU1 254 aaPredicted RBP20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 SLC7A10Q9NS82 523 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 ZANQ9Y493 2812 aa20.82■□□□□ 0.92
RHBDD3-206ENST00000493894 TLN2Q9Y4G6 2542 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 FAM234BA2RU67 622 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 RNF223E7ERA6 249 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 M0R1B8 84 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 PDLIM1O00151 329 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 IGHV4-39P01824 125 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 NCF2P19878 526 aaPredicted RBP20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 CD40P25942 277 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 ACAA2P42765 397 aaKnown RBP20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 FOXG1P55316 489 aaPredicted RBP20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 STX1BP61266 288 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 TGFBR3Q03167 851 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 SPOCK1Q08629 439 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 C9orf135Q5VTT2 229 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 AGAP6Q5VW22 663 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 SF3B5Q9BWJ5 86 aaKnown RBP20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 ZNF232Q9UNY5 417 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 AMDHD2Q9Y303 409 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 USH1CQ9Y6N9 552 aa20.81■□□□□ 0.92
RHBDD3-206ENST00000493894 A0A0G2JPF8 293 aa20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 AQP7P3A6NL99 342 aa20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 A8MVM7 634 aa20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 HNRNPCL2B2RXH8 293 aa20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 HNRNPCL3B7ZW38 293 aa20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 HNRNPCL1O60812 293 aaKnown RBP20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 AKR7A3O95154 331 aa20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 CD8AP01732 235 aa20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 HNRNPCL4P0DMR1 293 aa20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 ACVR1BP36896 505 aa20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 NRF1Q16656 503 aa20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 TSPO2Q5TGU0 170 aa20.8■□□□□ 0.92
RHBDD3-206ENST00000493894 DEPDC4Q8N2C3 294 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms