RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 GK3PQ14409 553 aa17.45■□□□□ 0.38
USP39-218ENST00000493829 GXYLT1Q4G148 440 aa17.45■□□□□ 0.38
USP39-218ENST00000493829 LRRC17Q8N6Y2 441 aa17.45■□□□□ 0.38
USP39-218ENST00000493829 NEIL3Q8TAT5 605 aa17.45■□□□□ 0.38
USP39-218ENST00000493829 SLC25A43Q8WUT9 341 aaPredicted RBP17.45■□□□□ 0.38
USP39-218ENST00000493829 SGTBQ96EQ0 304 aa17.45■□□□□ 0.38
USP39-218ENST00000493829 MOGAT1Q96PD6 335 aa17.45■□□□□ 0.38
USP39-218ENST00000493829 PTDSS2Q9BVG9 487 aa17.45■□□□□ 0.38
USP39-218ENST00000493829 KLHL4Q9C0H6 718 aa17.45■□□□□ 0.38
USP39-218ENST00000493829 EIF1AYO14602 144 aaKnown RBP17.44■□□□□ 0.38
USP39-218ENST00000493829 CDC42EP2O14613 210 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 TNFSF11O14788 317 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 MITFO75030 526 aaPredicted RBP17.44■□□□□ 0.38
USP39-218ENST00000493829 BMP7P18075 431 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 IDUAP35475 653 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 IFNGR2P38484 337 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 DAPP51397 102 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 RAC1P63000 192 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 DAG1Q14118 895 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 OR7A5Q15622 319 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 RNF113BQ8IZP6 322 aaKnown RBP17.44■□□□□ 0.38
USP39-218ENST00000493829 OR13C2Q8NGS9 318 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 STK35Q8TDR2 534 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 ABTB1Q969K4 478 aaPredicted RBP17.44■□□□□ 0.38
USP39-218ENST00000493829 KLHL15Q96M94 604 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 SLC19A3Q9BZV2 496 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 PRDM4Q9UKN5 801 aa17.44■□□□□ 0.38
USP39-218ENST00000493829 ARRDC5A6NEK1 342 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 EFCAB9A8MZ26 197 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 NPIPB7O75200 414 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 SFTPCP11686 197 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 CHMP24386 653 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 IGFBP5P24593 272 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 FAHD1Q6P587 224 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 GGNQ86UU5 652 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 CDK20Q8IZL9 346 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 LINC00471Q8N535 108 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 GNPDA2Q8TDQ7 276 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 ZNF556Q9HAH1 456 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 KRT84Q9NSB2 600 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 SEC14L4Q9UDX3 406 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 MGAT4BQ9UQ53 548 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 AP4B1Q9Y6B7 739 aa17.43■□□□□ 0.38
USP39-218ENST00000493829 TRAV27A0A087WT01 109 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 OR7A10O76100 309 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 SOX14O95416 240 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 IMPDH2P12268 514 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 LHX2P50458 406 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 SUCLG1P53597 346 aaKnown RBP17.42■□□□□ 0.38
USP39-218ENST00000493829 CTBP2P56545 445 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 PPP2R2BQ00005 443 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 LTBQ06643 244 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 ZNF74Q16587 644 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 PPP4R4Q6NUP7 873 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 C1orf94Q6P1W5 598 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 SLC46A3Q7Z3Q1 461 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 RBM4BQ9BQ04 359 aaKnown RBP17.42■□□□□ 0.38
USP39-218ENST00000493829 PSD2Q9BQI7 771 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 RBM4Q9BWF3 364 aaKnown RBP17.42■□□□□ 0.38
USP39-218ENST00000493829 OSBPL10Q9BXB5 764 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 TMEM5Q9Y2B1 443 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 BSNQ9UPA5 3926 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 A0A0J9YW62 118 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 GJE1A6NN92 205 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 ADAP00813 363 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 IGHG3P01860 377 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 BGLAPP02818 100 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 ALPLP05186 524 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 ANXA8P13928 327 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 GTF2E2P29084 291 aaKnown RBP17.42■□□□□ 0.38
USP39-218ENST00000493829 ALDH3A2P51648 485 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 OR2B6P58173 313 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 FAM69AQ5T7M9 428 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 SNRNP40Q96DI7 357 aaKnown RBP17.42■□□□□ 0.38
USP39-218ENST00000493829 TACO1Q9BSH4 297 aaKnown RBP17.42■□□□□ 0.38
USP39-218ENST00000493829 UCK2Q9BZX2 261 aa17.42■□□□□ 0.38
USP39-218ENST00000493829 PAPOLBQ9NRJ5 636 aaKnown RBP17.42■□□□□ 0.38
USP39-218ENST00000493829 TMEFF2Q9UIK5 374 aaPredicted RBP17.42■□□□□ 0.38
USP39-218ENST00000493829 TLN1Q9Y490 2541 aaKnown RBP17.42■□□□□ 0.38
USP39-218ENST00000493829 A0A1B0GTH9 108 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 UNC119BA6NIH7 251 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 KLF4O43474 513 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 HCN1O60741 890 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 IGFBP1P08833 259 aaPredicted RBP17.41■□□□□ 0.38
USP39-218ENST00000493829 KLK2P20151 261 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 FPR3P25089 353 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 EIF1AXP47813 144 aaKnown RBP17.41■□□□□ 0.38
USP39-218ENST00000493829 DIO1P49895 249 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 MAP2K6P52564 334 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 CLDN18P56856 261 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 NFATC3Q12968 1075 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 CTU2Q2VPK5 515 aaKnown RBP17.41■□□□□ 0.38
USP39-218ENST00000493829 ZIK1Q3SY52 487 aaPredicted RBP17.41■□□□□ 0.38
USP39-218ENST00000493829 KLHL17Q6TDP4 642 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 C5orf46Q6UWT4 87 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 OR51A7Q8NH64 312 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 TAPBPLQ9BX59 468 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 DGCR6LQ9BY27 220 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 NANSQ9NR45 359 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 ASF1BQ9NVP2 202 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms