RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 A6NIZ1 184 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 AIREO43918 545 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 SLC25A27O95847 323 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 MBD3O95983 291 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 PNMA6AP0CW24 399 aaPredicted RBP2.38□□□□□ -2.03
ITGB1-216ENST00000493758 ZNF823P16415 610 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 NPR2P20594 1047 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 CALCRP30988 508 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 MAP3K8P41279 467 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 GLP1RP43220 463 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 TDO2P48775 406 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 CCR6P51684 374 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 ZNF136P52737 540 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 RAP1BP61224 184 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 CNTN2Q02246 1040 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 TGFBR3Q03167 851 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 ASPHQ12797 758 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 MXD4Q14582 209 aaPredicted RBP2.38□□□□□ -2.03
ITGB1-216ENST00000493758 MESDQ14696 234 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 PSG5Q15238 335 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 CDC37Q16543 378 aaPredicted RBP2.38□□□□□ -2.03
ITGB1-216ENST00000493758 TATDN3Q17R31 274 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 SLC25A52Q3SY17 297 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 FAM71E1Q6IPT2 247 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 TMIGD1Q6UXZ0 262 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 KIAA1328Q86T90 577 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 CLEC4FQ8N1N0 589 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 LRRC43Q8N309 656 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 OR2L13Q8N349 312 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 ZNF561Q8N587 486 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 RAPGEF5Q92565 580 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 NDRG1Q92597 394 aaKnown RBP2.38□□□□□ -2.03
ITGB1-216ENST00000493758 ARPC1AQ92747 370 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 SH3YL1Q96HL8 342 aaPredicted RBP2.38□□□□□ -2.03
ITGB1-216ENST00000493758 OMDQ99983 421 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 ALG12Q9BV10 488 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 POLR1EQ9GZS1 481 aaKnown RBP2.38□□□□□ -2.03
ITGB1-216ENST00000493758 TMEM117Q9H0C3 514 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 NXF5Q9H1B4 397 aaKnown RBP2.38□□□□□ -2.03
ITGB1-216ENST00000493758 AATFQ9NY61 560 aaKnown RBP eCLIP2.38□□□□□ -2.03
ITGB1-216ENST00000493758 ODF2LQ9ULJ1 636 aa2.38□□□□□ -2.03
ITGB1-216ENST00000493758 SLIT3O75094 1523 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 SCN2AQ99250 2005 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 A0A1B0GUS0 222 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 LAD1O00515 517 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 MAPK13O15264 365 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 OR1F1O43749 312 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 MED6O75586 246 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 AK1P00568 194 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 RETP07949 1114 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 PLEKP08567 350 aaPredicted RBP2.37□□□□□ -2.03
ITGB1-216ENST00000493758 CXCR2P25025 360 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 GRB7Q14451 532 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 PTGES3Q15185 160 aaKnown RBP2.37□□□□□ -2.03
ITGB1-216ENST00000493758 CCDC57Q2TAC2 916 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 BOLA3Q53S33 107 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 TIGD3Q6B0B8 471 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 ZNF573Q86YE8 665 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 STXBP6Q8NFX7 210 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 ZNF596Q8TC21 504 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 DEDD2Q8WXF8 326 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 OSTF1Q92882 214 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 RAB7BQ96AH8 199 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 TM4SF19Q96DZ7 209 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 PAGE5Q96GU1 130 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 ZNF416Q9BWM5 594 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 RANBP3Q9H6Z4 567 aaPredicted RBP2.37□□□□□ -2.03
ITGB1-216ENST00000493758 TAS2R3Q9NYW6 316 aa2.37□□□□□ -2.03
ITGB1-216ENST00000493758 KDRP35968 1356 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 PLEKHH1Q9ULM0 1364 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 IDSB3KWA1 339 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 F5H6K3 240 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 FOXH1O75593 365 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 STAMBPO95630 424 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 ANXA13P27216 316 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 HOXA9P31269 272 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 MDH1P40925 334 aaKnown RBP2.36□□□□□ -2.03
ITGB1-216ENST00000493758 HTD2P86397 168 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 KLRC3Q07444 240 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 PJVKQ0ZLH3 352 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 ATP6AP1Q15904 470 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 BEND3Q5T5X7 828 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 ACOT1Q86TX2 421 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 GRAMD2AQ8IUY3 354 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 SYT14Q8NB59 555 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 OR9G1Q8NH87 305 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 TMEM158Q8WZ71 300 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 STARD8Q92502 1023 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 TMEM246Q9BRR3 403 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 ROGDIQ9GZN7 287 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 VCPKMTQ9H867 229 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 POLE3Q9NRF9 147 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 CLCF1Q9UBD9 225 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 TRAPPC4Q9Y296 219 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 MAP3K15Q6ZN16 1313 aa2.36□□□□□ -2.03
ITGB1-216ENST00000493758 LOC110117498-PIK3R3F6TDL0 507 aa2.35□□□□□ -2.03
ITGB1-216ENST00000493758 LRATO95237 230 aa2.35□□□□□ -2.03
ITGB1-216ENST00000493758 KRT8P05787 483 aa2.35□□□□□ -2.03
ITGB1-216ENST00000493758 MMP11P24347 488 aa2.35□□□□□ -2.03
ITGB1-216ENST00000493758 P2RY1P47900 373 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms