RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 TMEM225Q6GV28 225 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 SLC22A25Q6T423 547 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 CASP12Q6UXS9 341 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 FBXL14Q8N1E6 418 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 PIAS4Q8N2W9 510 aaPredicted RBP10.97□□□□□ -0.65
COL6A1-205ENST00000492851 POMGNT2Q8NAT1 580 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 OR52P1PQ8NH57 321 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 SLC35B4Q969S0 331 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 TMEM45BQ96B21 275 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 MAELQ96JY0 434 aaKnown RBP10.97□□□□□ -0.65
COL6A1-205ENST00000492851 DHRS9Q9BPW9 319 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 RHNO1Q9BSD3 238 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 TAPBPLQ9BX59 468 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 REG4Q9BYZ8 158 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 SLCO5A1Q9H2Y9 848 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 RAD21L1Q9H4I0 556 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 FKRPQ9H9S5 495 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 MOV10Q9HCE1 1003 aaKnown RBP10.97□□□□□ -0.65
COL6A1-205ENST00000492851 SDR39U1Q9NRG7 319 aaPredicted RBP10.97□□□□□ -0.65
COL6A1-205ENST00000492851 CBLN4Q9NTU7 201 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 AMDHD2Q9Y303 409 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 FLVCR1Q9Y5Y0 555 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 SLC25A15Q9Y619 301 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 DSCAMO60469 2012 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 A8MVM7 634 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 RNF223E7ERA6 249 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 KLF11O14901 512 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 UBDO15205 165 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 TLX2O43763 284 aaPredicted RBP10.96□□□□□ -0.65
COL6A1-205ENST00000492851 RAMP1O60894 148 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 WNT11O96014 354 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 IGHV3-9P01782 118 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 TFPTP0C1Z6 253 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 KITP10721 976 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 IMPDH2P12268 514 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 EDNRAP25101 427 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 MPGP29372 298 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 CDKN1AP38936 164 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 CDKN2CP42773 168 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 PRPS1P60891 318 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 DSTNP60981 165 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 CHRNB3Q05901 458 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 DMTNQ08495 405 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 COX20Q5RI15 118 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 OTUD3Q5T2D3 398 aaPredicted RBP10.96□□□□□ -0.65
COL6A1-205ENST00000492851 RNF220Q5VTB9 566 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 PRAMEF8Q5VWM4 474 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 PRAMEF7Q5VXH5 474 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 ZNF544Q6NX49 715 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.96□□□□□ -0.65
COL6A1-205ENST00000492851 MIER2Q8N344 545 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 OR52N5Q8NH56 324 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 PNPT1Q8TCS8 783 aaKnown RBP10.96□□□□□ -0.65
COL6A1-205ENST00000492851 NEUROG1Q92886 237 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 BOD1Q96IK1 185 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 TPT1P8Q9HAU6 139 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 OBP2BQ9NPH6 170 aa10.96□□□□□ -0.65
COL6A1-205ENST00000492851 NSD1Q96L73 2696 aaPredicted RBP10.95□□□□□ -0.66
COL6A1-205ENST00000492851 DSPPQ9NZW4 1301 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 LIPT2A6NK58 231 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 INAFM1C9JVW0 142 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 PDLIM1O00151 329 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 ADAM11O75078 769 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 KRT33AO76009 404 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 CD8AP01732 235 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 IGHV4-39P01824 125 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 NCF2P19878 526 aaPredicted RBP10.95□□□□□ -0.66
COL6A1-205ENST00000492851 NTF4P34130 210 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 FABP6P51161 128 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 ZNF83P51522 516 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 POLR2JP52435 117 aaKnown RBP10.95□□□□□ -0.66
COL6A1-205ENST00000492851 PLAURQ03405 335 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 FADDQ13158 208 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 CEACAM7Q14002 265 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 RAB35Q15286 201 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 KLHL24Q6TFL4 600 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 DNM1P46Q6ZS02 220 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 AAED1Q7RTV5 226 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 HMGN2P46Q86SG4 172 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 ATG4DQ86TL0 474 aaPredicted RBP10.95□□□□□ -0.66
COL6A1-205ENST00000492851 MUC15Q8N387 334 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 MGARPQ8TDB4 240 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 SLC38A5Q8WUX1 472 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 ZNF317Q96PQ6 595 aaPredicted RBP10.95□□□□□ -0.66
COL6A1-205ENST00000492851 SPATA9Q9BWV2 254 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 AMBRA1Q9C0C7 1298 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 TMEM45AQ9NWC5 275 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 NPAP1Q9NZP6 1156 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 B3GALT5Q9Y2C3 310 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 PMF1-BGLAPU3KQ54 211 aa10.95□□□□□ -0.66
COL6A1-205ENST00000492851 AQP7P3A6NL99 342 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 M0R1B8 84 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 CRLF1O75462 422 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 TGDSO95455 350 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 BCHEP06276 602 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 ITGA5P08648 1049 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 ETFAP13804 333 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 ACVR1BP36896 505 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 ACAA2P42765 397 aaKnown RBP10.94□□□□□ -0.66
COL6A1-205ENST00000492851 NUDT6P53370 316 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms