RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 OSGIN1Q9UJX0 560 aa7.72□□□□□ -1.17
NUP50-217ENST00000491860 FBXO9Q9UK97 447 aaPredicted RBP7.72□□□□□ -1.17
NUP50-217ENST00000491860 IFT52Q9Y366 437 aa7.72□□□□□ -1.17
NUP50-217ENST00000491860 GPR45Q9Y5Y3 372 aa7.72□□□□□ -1.17
NUP50-217ENST00000491860 A0A0G2JPF8 293 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 TMEM120BA0PK00 339 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 A8MVM7 634 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 HNRNPCL2B2RXH8 293 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 SHISA9B4DS77 424 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 HNRNPCL3B7ZW38 293 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 KLF11O14901 512 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 HNRNPCL1O60812 293 aaKnown RBP7.71□□□□□ -1.18
NUP50-217ENST00000491860 SNNO75324 88 aaPredicted RBP7.71□□□□□ -1.18
NUP50-217ENST00000491860 RAD51DO75771 328 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 IFNA2P01563 188 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 CHRM4P08173 479 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 ALDOCP09972 364 aaKnown RBP7.71□□□□□ -1.18
NUP50-217ENST00000491860 HNRNPCL4P0DMR1 293 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 PCSK6P29122 969 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 TACR3P29371 465 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 MPGP29372 298 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 TTKP33981 857 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 PRPS1P60891 318 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 CHRNB3Q05901 458 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 FADDQ13158 208 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 TNK1Q13470 666 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 SYPL1Q16563 259 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 PGGHGQ32M88 737 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 MRPL2Q5T653 305 aaKnown RBP7.71□□□□□ -1.18
NUP50-217ENST00000491860 NXNQ6DKJ4 435 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 C5orf46Q6UWT4 87 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 SEZ6L2Q6UXD5 910 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 PIAS4Q8N2W9 510 aaPredicted RBP7.71□□□□□ -1.18
NUP50-217ENST00000491860 MUC15Q8N387 334 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 ANKFN1Q8N957 763 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 ANKRD42Q8N9B4 389 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 OR52P1PQ8NH57 321 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 CNOT9Q92600 299 aaKnown RBP7.71□□□□□ -1.18
NUP50-217ENST00000491860 ZNF524Q96C55 264 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 BOD1Q96IK1 185 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 MAELQ96JY0 434 aaKnown RBP7.71□□□□□ -1.18
NUP50-217ENST00000491860 ARL5BQ96KC2 179 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 RHNO1Q9BSD3 238 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 REG4Q9BYZ8 158 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 AMBRA1Q9C0C7 1298 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 ADAM19Q9H013 955 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 MANSC1Q9H8J5 431 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 CBLN4Q9NTU7 201 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.71□□□□□ -1.18
NUP50-217ENST00000491860 ADAM21Q9UKJ8 722 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 FLVCR1Q9Y5Y0 555 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 SLC25A15Q9Y619 301 aa7.71□□□□□ -1.18
NUP50-217ENST00000491860 V9GYY5 206 aaPredicted RBP7.71□□□□□ -1.18
NUP50-217ENST00000491860 ABCA1O95477 2261 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 CHD3Q12873 2000 aaKnown RBP7.7□□□□□ -1.18
NUP50-217ENST00000491860 TMEM72A0PK05 275 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 PRAMEF27A3QJZ7 478 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 CDHR4A6H8M9 788 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 C9JVG2 144 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 INAFM1C9JVW0 142 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 PDLIM1O00151 329 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 UBDO15205 165 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 CRLF1O75462 422 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 KRT33AO76009 404 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 SLC25A16P16260 332 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 NCF2P19878 526 aaPredicted RBP7.7□□□□□ -1.18
NUP50-217ENST00000491860 PPIBP23284 216 aaKnown RBP7.7□□□□□ -1.18
NUP50-217ENST00000491860 CD40P25942 277 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 GTF2E2P29084 291 aaKnown RBP7.7□□□□□ -1.18
NUP50-217ENST00000491860 EPHA3P29320 983 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 CDKN1AP38936 164 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 CRATP43155 626 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 NME5P56597 212 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 DSTNP60981 165 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 STX1BP61266 288 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 FAPQ12884 760 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 SLC17A1Q14916 467 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 RAB35Q15286 201 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 GABRA6Q16445 453 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 OTUD3Q5T2D3 398 aaPredicted RBP7.7□□□□□ -1.18
NUP50-217ENST00000491860 TMEM225Q6GV28 225 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 CLEC2AQ6UVW9 174 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 DNM1P46Q6ZS02 220 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 MIER2Q8N344 545 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 ANKK1Q8NFD2 765 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 BHLHE22Q8NFJ8 381 aaPredicted RBP7.7□□□□□ -1.18
NUP50-217ENST00000491860 OR9K2Q8NGE7 335 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 OR52N5Q8NH56 324 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 STK35Q8TDR2 534 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 ZNF775Q96BV0 537 aaPredicted RBP7.7□□□□□ -1.18
NUP50-217ENST00000491860 ZG16BQ96DA0 208 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 TEX37Q96LM6 180 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 KCNS3Q9BQ31 491 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 INPP5KQ9BT40 448 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 OR11A1Q9GZK7 315 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 EVA1AQ9H8M9 152 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 TPT1P8Q9HAU6 139 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 C12orf10Q9HB07 376 aa7.7□□□□□ -1.18
NUP50-217ENST00000491860 SDR39U1Q9NRG7 319 aaPredicted RBP7.7□□□□□ -1.18
NUP50-217ENST00000491860 TMEM45AQ9NWC5 275 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms