RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 KIF18BQ86Y91 864 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 OR4D11Q8NGI4 311 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 LINC01560Q8TB33 94 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 DNAJA4Q8WW22 397 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 GEMIN6Q8WXD5 167 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 MBD6Q96DN6 1003 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 ASB9Q96DX5 294 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 POM121Q96HA1 1249 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 KLHL15Q96M94 604 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 ALPK1Q96QP1 1244 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 POLR2J2Q9GZM3 115 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 POLR2J3Q9H1A7 115 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 CTPS2Q9NRF8 586 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 SERINC1Q9NRX5 453 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 PAQR5Q9NXK6 330 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 CLCF1Q9UBD9 225 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 SH3GLB1Q9Y371 365 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 A0A0B4J2E0 115 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 A0A1B0GWA3 101 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 A0A1B0GX12 115 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 EBAG9O00559 213 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 DNAJC8O75937 253 aaPredicted RBP13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 TMIGD3P0DMS9 266 aaPredicted RBP13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 RPS3AP61247 264 aaKnown RBP13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 HOXC5Q00444 222 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 TRIM25Q14258 630 aaKnown RBP13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 SYT14P1Q58G82 188 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 MTX3Q5HYI7 312 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 LCN8Q6JVE9 175 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 PGM2L1Q6PCE3 622 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 ULK3Q6PHR2 472 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 PLXDC2Q6UX71 529 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 ADGRG3Q86Y34 549 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 UBQLNLQ8IYU4 475 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 CADM2Q8N3J6 435 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 SMPDL3BQ92485 455 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 TPD52L3Q96J77 140 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 HSH2DQ96JZ2 352 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 NSMCE2Q96MF7 247 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 ZFP3Q96NJ6 502 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 THTPAQ9BU02 230 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 SFXN3Q9BWM7 321 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 LRMDAQ9H2I8 198 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 TMEM185BQ9H7F4 350 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 PLEKHF2Q9H8W4 249 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 DLL4Q9NR61 685 aa13.43□□□□□ -0.26
CDC42SE1-205ENST00000491825 TMED7-TICAM2A0A0A6YYA0 188 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 CLCA1A8K7I4 914 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 SEC14L5O43304 696 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 PDE5AO76074 875 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 RCBTB2O95199 551 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 ATE1O95260 518 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 ZNF682O95780 498 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 PNMTP11086 282 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 KLK2P20151 261 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 DNASE1P24855 282 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 SHC1P29353 583 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 MSX2P35548 267 aaPredicted RBP13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 SUCLG1P53597 346 aaKnown RBP13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 SRYQ05066 204 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 FOXD4Q12950 439 aaPredicted RBP13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 OR1Q1Q15612 314 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 IFI44LQ53G44 452 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 VTCN1Q7Z7D3 282 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 RBM45Q8IUH3 476 aaKnown RBP13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 OR2V1Q8NHB1 315 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 VANGL1Q8TAA9 524 aaPredicted RBP13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 WNT2BQ93097 391 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 POP5Q969H6 163 aaKnown RBP13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 MCHR1Q99705 422 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 TM9SF2Q99805 663 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 MMADHCQ9H3L0 296 aaPredicted RBP13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 COQ10BQ9H8M1 238 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 TMEM27Q9HBJ8 222 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 GALNT8Q9NY28 637 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 RPS6KB2Q9UBS0 482 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 TMED7Q9Y3B3 224 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 HDGFL3Q9Y3E1 203 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 ZNF175Q9Y473 711 aa13.42□□□□□ -0.26
CDC42SE1-205ENST00000491825 MAP1AP78559 2803 aaPredicted RBP13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 ACANP16112 2415 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 A0A0J9YW62 118 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 A0A1W2PPR1 153 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 H0YC42 278 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 EIF1AYO14602 144 aaKnown RBP13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 GSC2O15499 205 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 DNPH1O43598 174 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 CHP2O43745 196 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 GOSR1O95249 250 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 HRGP04196 525 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 IFNW1P05000 195 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 TNFRSF1BP20333 461 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 ATP6V1B2P21281 511 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 CXCR1P25024 350 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 SLC7A1P30825 629 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 SFTPDP35247 375 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 TPD52P55327 224 aaPredicted RBP13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 TRAP1Q12931 704 aaKnown RBP13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 ALG10BQ5I7T1 473 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms